RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 NPTX2P47972 431 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 NCKAP1LP55160 1127 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 IFT88Q13099 833 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 AGBL2Q5U5Z8 902 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 NIPA1Q7RTP0 329 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 TMEM174Q8WUU8 243 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 SHC3Q92529 594 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 CD101Q93033 1021 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 SEMA4AQ9H3S1 761 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 TBX20Q9UMR3 447 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 PTPN22Q9Y2R2 807 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 SYNGAP1Q96PV0 1343 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 GMNCA6NCL1 334 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 SMIM23A6NLE4 172 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 MIF4GDA9UHW6 222 aaKnown RBP17.29■□□□□ 0.36
CNOT2-209ENST00000548159 TRAPPC3O43617 180 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 LYPLA2O95372 231 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 EGFRP00533 1210 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 CYP11B1P15538 503 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 DHX34Q14147 1143 aaKnown RBP17.29■□□□□ 0.36
CNOT2-209ENST00000548159 CCDC137Q6PK04 289 aaKnown RBP17.29■□□□□ 0.36
CNOT2-209ENST00000548159 FAM83AQ86UY5 434 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 C4orf19Q8IY42 314 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 OTUD6BQ8N6M0 293 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 HELQQ8TDG4 1101 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 RAPGEF5Q92565 580 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 TATDN2Q93075 761 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 CYFIP2Q96F07 1278 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 RMDN3Q96TC7 470 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 PI4K2AQ9BTU6 479 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 SLC38A10Q9HBR0 1119 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 PNMA2Q9UL42 364 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 PCDHA3Q9Y5H8 950 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 LOXHD1Q8IVV2 1947 aa17.29■□□□□ 0.36
CNOT2-209ENST00000548159 TLDC2A0PJX2 215 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 DENND3A2RUS2 1198 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 FAM187AA6NFU0 413 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 CTNNA2P26232 953 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 PMS2P54278 862 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 SLC29A2Q14542 456 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 SLC39A4Q6P5W5 647 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 MCF2L2Q86YR7 1114 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 ZNF564Q8TBZ8 553 aaPredicted RBP17.28■□□□□ 0.36
CNOT2-209ENST00000548159 ST6GALNAC4Q9H4F1 302 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 TBC1D22BQ9NU19 505 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 USP20Q9Y2K6 914 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 PFASO15067 1338 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 GZMAP12544 262 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 PSMC5P62195 406 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 TCEAL1Q15170 157 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 PHLDB2Q86SQ0 1253 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 TTLL6Q8N841 843 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 RPS6KC1Q96S38 1066 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 PABPC3Q9H361 631 aaKnown RBP17.28■□□□□ 0.36
CNOT2-209ENST00000548159 RIPK3Q9Y572 518 aa17.28■□□□□ 0.36
CNOT2-209ENST00000548159 SPOPO43791 374 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 RARAP10276 462 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 DLATP10515 647 aaKnown RBP17.27■□□□□ 0.36
CNOT2-209ENST00000548159 CHRNA3P32297 505 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 PPP2R5EQ16537 467 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 FKBP1CQ5VVH2 108 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 KRT39Q6A163 491 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 ZNF653Q96CK0 615 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 PSMD1Q99460 953 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 PDCD2LQ9BRP1 358 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 TRIM7Q9C029 511 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 CAPN7Q9Y6W3 813 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 WDR46O15213 610 aaKnown RBP17.27■□□□□ 0.36
CNOT2-209ENST00000548159 GRIN3BO60391 1043 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 SORBS3O60504 671 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 KIAA0754O94854 1291 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 MFAP3P55082 362 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 MAP3K10Q02779 954 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 C2CD6Q53TS8 623 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 RNF187Q5TA31 235 aaPredicted RBP17.27■□□□□ 0.36
CNOT2-209ENST00000548159 TLCD1Q96CP7 247 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 PCYOX1Q9UHG3 505 aa17.27■□□□□ 0.36
CNOT2-209ENST00000548159 DDX20Q9UHI6 824 aaKnown RBP17.27■□□□□ 0.36
CNOT2-209ENST00000548159 ADGRA3Q8IWK6 1321 aa17.27■□□□□ 0.35
CNOT2-209ENST00000548159 PSME4Q14997 1843 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 FGFR4P22455 802 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 DRG2P55039 364 aaKnown RBP17.26■□□□□ 0.35
CNOT2-209ENST00000548159 SIX1Q15475 284 aaPredicted RBP17.26■□□□□ 0.35
CNOT2-209ENST00000548159 SEL1L2Q5TEA6 688 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 LLGL2Q6P1M3 1020 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 SV2AQ7L0J3 742 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 SLC13A5Q86YT5 568 aaPredicted RBP17.26■□□□□ 0.35
CNOT2-209ENST00000548159 DDX1Q92499 740 aaKnown RBP17.26■□□□□ 0.35
CNOT2-209ENST00000548159 PAGR1Q9BTK6 254 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 MAPK13O15264 365 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 ZNF862O60290 1169 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 MTA2O94776 668 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 CYP1A2P05177 515 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 FNTAP49354 379 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 IFI35P80217 286 aaPredicted RBP17.26■□□□□ 0.35
CNOT2-209ENST00000548159 SP4Q02446 784 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 CXCL9Q07325 125 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 C6orf89Q6UWU4 347 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 MAP4K3Q8IVH8 894 aa17.26■□□□□ 0.35
CNOT2-209ENST00000548159 CCDC105Q8IYK2 499 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms