RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 TTC38Q5R3I4 469 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 GPR158Q5T848 1215 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 BMP8AQ7Z5Y6 402 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 DGKHQ86XP1 1220 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 ANKRD53Q8N9V6 530 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 MS4A5Q9H3V2 200 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 CABP5Q9NP86 173 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 MAGEL2Q9UJ55 1249 aa5.38□□□□□ -1.55
SCAF11-210ENST00000547654 UBA6A0AVT1 1052 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-210ENST00000547654 RFPL1O75677 317 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 RHOBTB3O94955 611 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 ZSCAN20P17040 1043 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-210ENST00000547654 BPIP17213 487 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 ADCYAP1R1P41586 468 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 ROM1Q03395 351 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 ZBTB41Q5SVQ8 909 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 IQSEC1Q6DN90 963 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 SLFN12LQ6IEE8 588 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 CXorf57Q6NSI4 855 aaKnown RBP5.37□□□□□ -1.55
SCAF11-210ENST00000547654 FAM111BQ6SJ93 734 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 MRGPREQ86SM8 312 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 PNISRQ8TF01 805 aaKnown RBP5.37□□□□□ -1.55
SCAF11-210ENST00000547654 COG1Q8WTW3 980 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 JPH3Q8WXH2 748 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-210ENST00000547654 RTF1Q92541 710 aaKnown RBP5.37□□□□□ -1.55
SCAF11-210ENST00000547654 TCF25Q9BQ70 676 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 ENKD1Q9H0I2 346 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 PRDM11Q9NQV5 511 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 KCMF1Q9P0J7 381 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 RCAN3Q9UKA8 241 aa5.37□□□□□ -1.55
SCAF11-210ENST00000547654 CCDC189A1A4V9 331 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 UBE2QL1A1L167 161 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 LCHNA4D1U4 455 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 VSTM5A8MXK1 200 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 NEMP1O14524 444 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 GABRDO14764 452 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 PRPF6O94906 941 aaKnown RBP5.36□□□□□ -1.55
SCAF11-210ENST00000547654 GCP02774 474 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 CCND1P24385 295 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 IL2P60568 153 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 TERF2Q15554 542 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 PTPN21Q16825 1174 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 FKBP15Q5T1M5 1219 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 KRT40Q6A162 431 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 KIAA1841Q6NSI8 718 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 C11orf96Q7Z7L8 435 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 NME9Q86XW9 330 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 ZNF276Q8N554 614 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 MB21D1Q8N884 522 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 FBXO41Q8TF61 875 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 EVI5LQ96CN4 794 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 PGBD4Q96DM1 585 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 ARPC5LQ9BPX5 153 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 PRDM12Q9H4Q4 367 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 IL23AQ9NPF7 189 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 CHST12Q9NRB3 414 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 SPTLC3Q9NUV7 552 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.36□□□□□ -1.55
SCAF11-210ENST00000547654 IP6K2Q9UHH9 426 aa5.36□□□□□ -1.55
SCAF11-210ENST00000547654 LUC7L2Q9Y383 392 aaKnown RBP5.36□□□□□ -1.55
SCAF11-210ENST00000547654 GOLGA6L6A8MZA4 724 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 OPHN1O60890 802 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 WDHD1O75717 1129 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-210ENST00000547654 ABLIM3O94929 683 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 SNUPNO95149 360 aaKnown RBP5.35□□□□□ -1.55
SCAF11-210ENST00000547654 PFKMP08237 780 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 MRPS21P82921 87 aaKnown RBP5.35□□□□□ -1.55
SCAF11-210ENST00000547654 ADCY1Q08828 1119 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 PICALMQ13492 652 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 RABL3Q5HYI8 236 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-210ENST00000547654 PHYKPLQ8IUZ5 450 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 PPM1EQ8WY54 764 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 E2F7Q96AV8 911 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 ARL8AQ96BM9 186 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 NAP1L4Q99733 375 aaKnown RBP5.35□□□□□ -1.55
SCAF11-210ENST00000547654 FDXACB1Q9BRP7 624 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-210ENST00000547654 MYL10Q9BUA6 226 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 RHOBTB2Q9BYZ6 727 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 POFUT1Q9H488 388 aa5.35□□□□□ -1.55
SCAF11-210ENST00000547654 BCCIPQ9P287 314 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCAF11-210ENST00000547654 NPHP1O15259 732 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 GAS7O60861 476 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 IPO13O94829 963 aaKnown RBP5.34□□□□□ -1.55
SCAF11-210ENST00000547654 SEC24DO94855 1032 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-210ENST00000547654 MYBL2P10244 700 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 FBLP22087 321 aaKnown RBP5.34□□□□□ -1.55
SCAF11-210ENST00000547654 ADRA1BP35368 520 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 LSSP48449 732 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 BCAR1P56945 870 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 PTPAQ15257 358 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 ZNF174Q15697 407 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 DGKDQ16760 1214 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 CCDC142Q17RM4 750 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 ABCB5Q2M3G0 1257 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 MINDY4Q4G0A6 757 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 GAGE13Q4V321 117 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 LY6G5CQ5SRR4 150 aa5.34□□□□□ -1.55
SCAF11-210ENST00000547654 C10orf62Q5T681 223 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms