RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 USP20Q9Y2K6 914 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 PTPN22Q9Y2R2 807 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 SYNGAP1Q96PV0 1343 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 IGSF9BQ9UPX0 1349 aa11.46□□□□□ -0.57
NPAS3-205ENST00000547068 SLX4Q8IY92 1834 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 FAM170AA1A519 330 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 ANKRD63C9JTQ0 380 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 MAPK13O15264 365 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 SLC37A4O43826 429 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 UFL1O94874 794 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 TTLL1O95922 423 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 SKIP12755 728 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 XRCC5P13010 732 aaKnown RBP11.46□□□□□ -0.58
NPAS3-205ENST00000547068 TAC1P20366 129 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 YARSP54577 528 aaKnown RBP11.46□□□□□ -0.58
NPAS3-205ENST00000547068 JAM2P57087 298 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 CACNB1Q02641 598 aaPredicted RBP11.46□□□□□ -0.58
NPAS3-205ENST00000547068 ADCY1Q08828 1119 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 CALCOCO2Q13137 446 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 ECM1Q16610 540 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 EDRF1Q3B7T1 1238 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 GJB7Q6PEY0 223 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 PPP4R3CPQ6ZMV5 832 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 TRIM74Q86UV6 250 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 TRIM73Q86UV7 250 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 CCDC105Q8IYK2 499 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 REXO1Q8N1G1 1221 aaKnown RBP11.46□□□□□ -0.58
NPAS3-205ENST00000547068 ZNF384Q8TF68 577 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 SLC7A6OSQ96CW6 309 aaPredicted RBP11.46□□□□□ -0.58
NPAS3-205ENST00000547068 FHDC1Q9C0D6 1143 aaPredicted RBP11.46□□□□□ -0.58
NPAS3-205ENST00000547068 TMEM260Q9NX78 707 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 USH1CQ9Y6N9 552 aa11.46□□□□□ -0.58
NPAS3-205ENST00000547068 KLRF2D3W0D1 207 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 LMNB1P20700 586 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 STAT1P42224 750 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 TCERG1LQ5VWI1 586 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 CYFIP1Q7L576 1253 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 FRMD5Q7Z6J6 570 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 ZC3H3Q8IXZ2 948 aaKnown RBP11.45□□□□□ -0.58
NPAS3-205ENST00000547068 SLC30A5Q8TAD4 765 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 NT5C3AQ9H0P0 336 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 ATP8A2Q9NTI2 1148 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 G3BP2Q9UN86 482 aaKnown RBP11.45□□□□□ -0.58
NPAS3-205ENST00000547068 PCDHA2Q9Y5H9 948 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 MROH7Q68CQ1 1323 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 PASKQ96RG2 1323 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 ATP9AO75110 1047 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 DCTN3O75935 186 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 TDP2O95551 362 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 PYGBP11216 843 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 CTNNA2P26232 953 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 FOXN2P32314 431 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 CACNA2D1P54289 1103 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 EPHA7Q15375 998 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 PPP1R21Q6ZMI0 780 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 ZC3H18Q86VM9 953 aaKnown RBP11.45□□□□□ -0.58
NPAS3-205ENST00000547068 RTKN2Q8IZC4 609 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 ATL2Q8NHH9 583 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 ZHX3Q9H4I2 956 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 GCNT4Q9P109 453 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 TBK1Q9UHD2 729 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 RPL26L1Q9UNX3 145 aaKnown RBP11.45□□□□□ -0.58
NPAS3-205ENST00000547068 BCS1LQ9Y276 419 aa11.45□□□□□ -0.58
NPAS3-205ENST00000547068 USP17L3A6NCW0 530 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 USP17L4A6NCW7 530 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 PALM3A6NDB9 673 aaPredicted RBP11.44□□□□□ -0.58
NPAS3-205ENST00000547068 SIGLEC16A6NMB1 481 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 SMAPO00193 183 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 CBX6O95503 412 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 T-ENOLP0DO92 83 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 ALAS1P13196 640 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 IL9RQ01113 521 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 USP4Q13107 963 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 ZNF568Q3ZCX4 644 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 SNX30Q5VWJ9 437 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 SEPT14Q6ZU15 432 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 USP17L1Q7RTZ2 530 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 SDCCAG8Q86SQ7 713 aaPredicted RBP11.44□□□□□ -0.58
NPAS3-205ENST00000547068 SRRM1Q8IYB3 904 aaKnown RBP11.44□□□□□ -0.58
NPAS3-205ENST00000547068 ZDHHC14Q8IZN3 488 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 UBL4BQ8N7F7 174 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 C7orf43Q8WVR3 580 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 SCG3Q8WXD2 468 aaKnown RBP11.44□□□□□ -0.58
NPAS3-205ENST00000547068 ARHGEF26Q96DR7 871 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 GBP5Q96PP8 586 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 EYA3Q99504 573 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 LZTS2Q9BRK4 669 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 UBE2OQ9C0C9 1292 aaKnown RBP11.44□□□□□ -0.58
NPAS3-205ENST00000547068 ZC3H12CQ9C0D7 883 aaKnown RBP11.44□□□□□ -0.58
NPAS3-205ENST00000547068 SIX2Q9NPC8 291 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 DMAP1Q9NPF5 467 aaPredicted RBP11.44□□□□□ -0.58
NPAS3-205ENST00000547068 MCM9Q9NXL9 1143 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 STX8Q9UNK0 236 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 STARD13Q9Y3M8 1113 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 RPS6KL1Q9Y6S9 549 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 COL1A1P02452 1464 aaPredicted RBP11.44□□□□□ -0.58
NPAS3-205ENST00000547068 NPHP3-ACAD11A0A0J9YXS1 232 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 G3V3G9 751 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 CREB3O43889 395 aa11.44□□□□□ -0.58
NPAS3-205ENST00000547068 MARK3P27448 753 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms