RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 SCP2P22307 547 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 AKAP5P24588 427 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 NRIP1P48552 1158 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 SCNN1GP51170 649 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 AFF1P51825 1210 aaKnown RBP17.48■□□□□ 0.39
DDX54-204ENST00000546898 DSC1Q08554 894 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 RAD51AP2Q09MP3 1159 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 GRIK3Q13003 919 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 ADAM15Q13444 863 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 SMC1AQ14683 1233 aaKnown RBP17.48■□□□□ 0.39
DDX54-204ENST00000546898 STK38Q15208 465 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 ARSHQ5FYA8 562 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 NT5DC1Q5TFE4 455 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 PLPP4Q5VZY2 271 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 EP400NLQ6ZTU2 488 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 TMC7Q7Z402 723 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 DDX53Q86TM3 631 aaKnown RBP17.48■□□□□ 0.39
DDX54-204ENST00000546898 TMEM173Q86WV6 379 aaPredicted RBP17.48■□□□□ 0.39
DDX54-204ENST00000546898 LRRC15Q8TF66 581 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 KCNN1Q92952 543 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 EPSTI1Q96J88 318 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 ZFP42Q96MM3 310 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 RPS6KC1Q96S38 1066 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 MRPL4Q9BYD3 311 aaKnown RBP17.48■□□□□ 0.39
DDX54-204ENST00000546898 IGFLR1Q9H665 355 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 TLE6Q9H808 572 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 PARP2Q9UGN5 583 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 PCDHGC5Q9Y5F6 944 aa17.48■□□□□ 0.39
DDX54-204ENST00000546898 SLC16A4O15374 487 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 NR1I2O75469 434 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 F13A1P00488 732 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 ALDH2P05091 517 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 GTF2F1P35269 517 aaKnown RBP eCLIP17.47■□□□□ 0.39
DDX54-204ENST00000546898 LTBRP36941 435 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 MCM6Q14566 821 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 DUSP6Q16828 381 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 EEF1DP3Q658K8 133 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 TAS1R3Q7RTX0 852 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 COLGALT2Q8IYK4 626 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 LINC00301Q8NCQ3 95 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 CLIC6Q96NY7 704 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 UHRF1Q96T88 793 aaPredicted RBP17.47■□□□□ 0.39
DDX54-204ENST00000546898 ACO2Q99798 780 aaKnown RBP17.47■□□□□ 0.39
DDX54-204ENST00000546898 REEP2Q9BRK0 252 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 ZBP1Q9H171 429 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 FAM50BQ9Y247 325 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 FAN1Q9Y2M0 1017 aa17.47■□□□□ 0.39
DDX54-204ENST00000546898 PDCD11Q14690 1871 aaKnown RBP17.47■□□□□ 0.39
DDX54-204ENST00000546898 SFI1A8K8P3 1242 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 H3BQ06 376 aaPredicted RBP17.46■□□□□ 0.39
DDX54-204ENST00000546898 NRP1O14786 923 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 PPP6R2O75170 966 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 TBX10O75333 385 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 RECQL4O94761 1208 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 YEATS4O95619 227 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 KRT18P05783 430 aaKnown RBP17.46■□□□□ 0.39
DDX54-204ENST00000546898 SRGAP2BP0DMP2 458 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 DDIT3P35638 169 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 NDUFV1P49821 464 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 ZNF131P52739 623 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 NCKAP1LP55160 1127 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
DDX54-204ENST00000546898 STRN3Q13033 797 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 GIT2Q14161 759 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 DHX8Q14562 1220 aaKnown RBP17.46■□□□□ 0.39
DDX54-204ENST00000546898 SPECC1Q5M775 1068 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 USP49Q70CQ1 688 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 RBM23Q86U06 439 aaKnown RBP17.46■□□□□ 0.39
DDX54-204ENST00000546898 TMEM161BQ8NDZ6 487 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 GSTCDQ8NEC7 633 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.46■□□□□ 0.39
DDX54-204ENST00000546898 BCL7CQ8WUZ0 217 aaPredicted RBP17.46■□□□□ 0.39
DDX54-204ENST00000546898 PARVGQ9HBI0 331 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 MIOSQ9NXC5 875 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 SNTG2Q9NY99 539 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 USP20Q9Y2K6 914 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 IRAK3Q9Y616 596 aa17.46■□□□□ 0.39
DDX54-204ENST00000546898 NPHP3-ACAD11A0A0J9YXS1 232 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 SPTLC2O15270 562 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 LINC01565O15544 149 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 TBCAO75347 108 aaKnown RBP17.45■□□□□ 0.38
DDX54-204ENST00000546898 FAM13AO94988 1023 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 CTSAP10619 480 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 MAPTP10636 758 aaKnown RBP17.45■□□□□ 0.38
DDX54-204ENST00000546898 ABCD1P33897 745 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 OR1G1P47890 313 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 ZNF568Q3ZCX4 644 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 RRAGBQ5VZM2 374 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 ATL3Q6DD88 541 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 PTCRAQ6ISU1 281 aaPredicted RBP17.45■□□□□ 0.38
DDX54-204ENST00000546898 CCDC73Q6ZRK6 1079 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 VPS52Q8N1B4 723 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 CDT1Q9H211 546 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 PTPRHQ9HD43 1115 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 KLK14Q9P0G3 267 aa17.45■□□□□ 0.38
DDX54-204ENST00000546898 GRXCR2A6NFK2 248 aa17.44■□□□□ 0.38
DDX54-204ENST00000546898 C2orf71A6NGG8 1288 aa17.44■□□□□ 0.38
DDX54-204ENST00000546898 HIDE1A8MVS5 230 aa17.44■□□□□ 0.38
DDX54-204ENST00000546898 GLP2RO95838 553 aa17.44■□□□□ 0.38
DDX54-204ENST00000546898 MCF2P10911 925 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms