RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 LIG4P49917 911 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 EHHADHQ08426 723 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 SNW1Q13573 536 aaKnown RBP18.42■□□□□ 0.54
CCDC38-203ENST00000546803 ZC2HC1CQ53FD0 456 aaPredicted RBP18.42■□□□□ 0.54
CCDC38-203ENST00000546803 FAM26FQ5R3K3 315 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 Q7L0L9 218 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 TMEM192Q8IY95 271 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 TIGD1Q96MW7 591 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 FAM161BQ96MY7 647 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 ACCSQ96QU6 501 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 PLVAPQ9BX97 442 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 CDT1Q9H211 546 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 RNF39Q9H2S5 420 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 AAASQ9NRG9 546 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 MTMR10Q9NXD2 777 aa18.42■□□□□ 0.54
CCDC38-203ENST00000546803 CARNS1A5YM72 827 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 ABLIM1O14639 778 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 LINC00271P0C7V0 271 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 BMPR1AP36894 532 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 UBE2HP62256 183 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 MCL1Q07820 350 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 GRIN2CQ14957 1233 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 EPC2Q52LR7 807 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 L1TD1Q5T7N2 865 aaKnown RBP18.41■□□□□ 0.54
CCDC38-203ENST00000546803 ARNTL2Q8WYA1 636 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 CCDC47Q96A33 483 aaKnown RBP18.41■□□□□ 0.54
CCDC38-203ENST00000546803 C17orf80Q9BSJ5 609 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 APOL6Q9BWW8 343 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 TMEM206Q9H813 350 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 TYW1Q9NV66 732 aaKnown RBP18.41■□□□□ 0.54
CCDC38-203ENST00000546803 PARP2Q9UGN5 583 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 INPP5FQ9Y2H2 1132 aa18.41■□□□□ 0.54
CCDC38-203ENST00000546803 C5orf67F2Z3F1 127 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 EIF3DO15371 548 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCDC38-203ENST00000546803 GADD45BO75293 160 aaPredicted RBP18.4■□□□□ 0.54
CCDC38-203ENST00000546803 MYBP10242 640 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 LAG3P18627 525 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 AKAP5P24588 427 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 GRM5P41594 1212 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 PSMD2Q13200 908 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 NOLC1Q14978 699 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCDC38-203ENST00000546803 KYAT1Q16773 422 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 SPOUT1Q5T280 376 aaKnown RBP18.4■□□□□ 0.54
CCDC38-203ENST00000546803 SLFN12LQ6IEE8 588 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 LRRC55Q6ZSA7 311 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 ZBTB33Q86T24 672 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 FBXO22Q8NEZ5 403 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 ZBTB45Q96K62 511 aaPredicted RBP18.4■□□□□ 0.54
CCDC38-203ENST00000546803 GBP4Q96PP9 640 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 GAD1Q99259 594 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 CCDC94Q9BW85 323 aaPredicted RBP18.4■□□□□ 0.54
CCDC38-203ENST00000546803 CWH43Q9H720 699 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 CERS4Q9HA82 394 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 EXOC1Q9NV70 894 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 TBC1D13Q9NVG8 400 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 SNTG2Q9NY99 539 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 ANKFY1Q9P2R3 1169 aa18.4■□□□□ 0.54
CCDC38-203ENST00000546803 HOOK1Q9UJC3 728 aaKnown RBP18.4■□□□□ 0.54
CCDC38-203ENST00000546803 ARL5CA6NH57 179 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 KLRC4O43908 158 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 RECQL4O94761 1208 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 CTNNB1P35222 781 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 MLH1P40692 756 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 MATR3P43243 847 aaKnown RBP eCLIP18.39■□□□□ 0.53
CCDC38-203ENST00000546803 CASP5P51878 434 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 RNASELQ05823 741 aaKnown RBP18.39■□□□□ 0.53
CCDC38-203ENST00000546803 DPYDQ12882 1025 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 POSTNQ15063 836 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 SPRED2Q7Z698 418 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 ELOA2Q8IYF1 753 aaPredicted RBP18.39■□□□□ 0.53
CCDC38-203ENST00000546803 P2RX5Q93086 422 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 HPS3Q969F9 1004 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 RPS6KC1Q96S38 1066 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 C11orf84Q9BUA3 381 aaPredicted RBP18.39■□□□□ 0.53
CCDC38-203ENST00000546803 PRDM12Q9H4Q4 367 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 MTUS1Q9ULD2 1270 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 PCDHB12Q9Y5F1 795 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 STYXL1Q9Y6J8 313 aa18.39■□□□□ 0.53
CCDC38-203ENST00000546803 A0A0B4J269 797 aa18.38■□□□□ 0.53
CCDC38-203ENST00000546803 KINO60870 393 aaKnown RBP18.38■□□□□ 0.53
CCDC38-203ENST00000546803 PRPF40AO75400 957 aaKnown RBP18.38■□□□□ 0.53
CCDC38-203ENST00000546803 NR1I2O75469 434 aa18.38■□□□□ 0.53
CCDC38-203ENST00000546803 RPN1P04843 607 aaKnown RBP18.38■□□□□ 0.53
CCDC38-203ENST00000546803 YARSP54577 528 aaKnown RBP18.38■□□□□ 0.53
CCDC38-203ENST00000546803 KMT5BQ4FZB7 885 aa18.38■□□□□ 0.53
CCDC38-203ENST00000546803 EPM2AIP1Q7L775 607 aaPredicted RBP18.38■□□□□ 0.53
CCDC38-203ENST00000546803 SYCP3Q8IZU3 236 aa18.38■□□□□ 0.53
CCDC38-203ENST00000546803 GUCD1Q96NT3 240 aa18.38■□□□□ 0.53
CCDC38-203ENST00000546803 ACAP3Q96P50 834 aa18.38■□□□□ 0.53
CCDC38-203ENST00000546803 FAM193BQ96PV7 902 aaPredicted RBP18.38■□□□□ 0.53
CCDC38-203ENST00000546803 CDX2Q99626 313 aaPredicted RBP18.38■□□□□ 0.53
CCDC38-203ENST00000546803 FGFBP2Q9BYJ0 223 aa18.38■□□□□ 0.53
CCDC38-203ENST00000546803 TOPORSQ9NS56 1045 aaPredicted RBP18.38■□□□□ 0.53
CCDC38-203ENST00000546803 GDAQ9Y2T3 454 aa18.38■□□□□ 0.53
CCDC38-203ENST00000546803 PTPRSQ13332 1948 aa18.38■□□□□ 0.53
CCDC38-203ENST00000546803 UBE4BO95155 1302 aa18.38■□□□□ 0.53
CCDC38-203ENST00000546803 H3BNC9 293 aa18.37■□□□□ 0.53
CCDC38-203ENST00000546803 OGTO15294 1046 aa18.37■□□□□ 0.53
CCDC38-203ENST00000546803 PRPF6O94906 941 aaKnown RBP18.37■□□□□ 0.53
CCDC38-203ENST00000546803 POMCP01189 267 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms