RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 KRT76Q01546 638 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 ZNF667Q5HYK9 610 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 HAUS6Q7Z4H7 955 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 MDM1Q8TC05 714 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 CYP26B1Q9NR63 512 aa12.99□□□□□ -0.33
NPC1L1-204ENST00000546276 M0QZ92 97 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 TBX3O15119 743 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 CCDC22O60826 627 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 EPHB1P54762 984 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 SLC29A2Q14542 456 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 RGS9BPQ6ZS82 235 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 MCUQ8NE86 351 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 RBM15Q96T37 977 aaKnown RBP eCLIP12.98□□□□□ -0.336e-6■■■■□ 20.3
NPC1L1-204ENST00000546276 CARD9Q9H257 536 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 NOD2Q9HC29 1040 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 ASNSD1Q9NWL6 643 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 ALG6Q9Y672 507 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 MAP2P11137 1827 aaKnown RBP12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 DIP2CQ9Y2E4 1556 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 HIF1AQ16665 826 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 BZW1Q7L1Q6 419 aaKnown RBP12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 RAB44Q7Z6P3 723 aaPredicted RBP12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 ERP27Q96DN0 273 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 SH3GL3Q99963 347 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 VCPKMTQ9H867 229 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 RPF1Q9H9Y2 349 aaKnown RBP12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 CSADQ9Y600 493 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 RIMBP3CA6NJZ7 1639 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 RIMBP3BA6NNM3 1639 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 RIMBP3Q9UFD9 1639 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 CCDC195A0A1B0GUA6 201 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 ESYT2A0FGR8 921 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 NOP14P78316 857 aaKnown RBP12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 TMED1Q13445 227 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 LONP2Q86WA8 852 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 NUDCD3Q8IVD9 361 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 C7orf31Q8N865 590 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 RAPGEF5Q92565 580 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 C9orf72Q96LT7 481 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 FGD4Q96M96 766 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 OLFM3Q96PB7 478 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 VWDEQ8N2E2 1590 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 UBE4BO95155 1302 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 SLIT1O75093 1534 aa12.98□□□□□ -0.33
NPC1L1-204ENST00000546276 MAP2K7O14733 419 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 XPOTO43592 962 aaKnown RBP12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 IRX1P78414 480 aaPredicted RBP12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 COL23A1Q86Y22 540 aaPredicted RBP12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 KIF2BQ8N4N8 673 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 DCLK2Q8N568 766 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 MARCH10Q8NA82 808 aaPredicted RBP12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 NAGPAQ9UK23 515 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 MAGED2Q9UNF1 606 aaPredicted RBP12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 FIS1Q9Y3D6 152 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 RASA1P20936 1047 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 COMTP21964 271 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 SMARCA1P28370 1054 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 CA8P35219 290 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 PPP6R3Q5H9R7 873 aaPredicted RBP12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 NACA2Q9H009 215 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 PABPC3Q9H361 631 aaKnown RBP12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 YY1AP1Q9H869 796 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 KIF20BQ96Q89 1820 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 IGF2BP3O00425 579 aaKnown RBP eCLIP12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 SFNP31947 248 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 PGM1P36871 562 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 SF3B3Q15393 1217 aaKnown RBP12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 WWP1Q9H0M0 922 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 UPF3AQ9H1J1 476 aaKnown RBP12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 SNX25Q9H3E2 840 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 ANLNQ9NQW6 1124 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 PARVAQ9NVD7 372 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 AKT3Q9Y243 479 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 PHEXP78562 749 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 THOC5Q13769 683 aaKnown RBP12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 MIGA2Q7L4E1 593 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 LRRC34Q8IZ02 419 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 HAUS8Q9BT25 410 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 MKNK1Q9BUB5 465 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 FOXP3Q9BZS1 431 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 ARHGAP20Q9P2F6 1191 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 SLC9A2Q9UBY0 812 aa12.97□□□□□ -0.33
NPC1L1-204ENST00000546276 KLC1Q07866 573 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 P3H1Q32P28 736 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 GPD1LQ8N335 351 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 RMDN3Q96TC7 470 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 PFDN6O15212 129 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 SRGAP2CP0DJJ0 459 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 NPR1P16066 1061 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 PSMC5P62195 406 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 GRB10Q13322 594 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 KYNUQ16719 465 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 ZNF699Q32M78 642 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 TMCO4Q5TGY1 634 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 FAM129AQ9BZQ8 928 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 PCSK1NQ9UHG2 260 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 FEM1BQ9UK73 627 aa12.96□□□□□ -0.33
NPC1L1-204ENST00000546276 NOD1Q9Y239 953 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms