RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 HAUS6Q7Z4H7 955 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 SLC47A2Q86VL8 602 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 SLC13A5Q86YT5 568 aaPredicted RBP16.43■□□□□ 0.22
CNN3-207ENST00000545882 CHMP6Q96FZ7 201 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 SH2D3AQ9BRG2 576 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 GLIS2Q9BZE0 524 aaPredicted RBP16.43■□□□□ 0.22
CNN3-207ENST00000545882 ACTR5Q9H9F9 607 aaPredicted RBP16.43■□□□□ 0.22
CNN3-207ENST00000545882 SLC40A1Q9NP59 571 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 CNTNAP1P78357 1384 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 TLDC2A0PJX2 215 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 TMEM150BA6NC51 233 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 MAPK13O15264 365 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 PMM2O15305 246 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 CYP1A2P05177 515 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 MMEP08473 750 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 RARAP10276 462 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 CETN1Q12798 172 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 SEL1L2Q5TEA6 688 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 SAMD1Q6SPF0 538 aaPredicted RBP16.43■□□□□ 0.22
CNN3-207ENST00000545882 ARMC9Q7Z3E5 817 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 CDAN1Q8IWY9 1227 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 MORC4Q8TE76 937 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 CCT6BQ92526 530 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 ART4Q93070 314 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 AGBL1Q96MI9 1066 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 TMEM109Q9BVC6 243 aa16.43■□□□□ 0.22
CNN3-207ENST00000545882 ZNF536O15090 1300 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 GOLGB1Q14789 3259 aaKnown RBP16.42■□□□□ 0.22
CNN3-207ENST00000545882 CLRN2A0PK11 232 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 GOLGA8IPA6NC78 632 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 SPDYE2BA6NHP3 402 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 GOLGA8JA6NMD2 632 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 CCDC169A6NNP5 214 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 PPIP5K2O43314 1243 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 CTNND1O60716 968 aaKnown RBP16.42■□□□□ 0.22
CNN3-207ENST00000545882 SPDYE6P0CI01 402 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 KCNJ1P48048 391 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 MNAT1P51948 309 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 RASA3Q14644 834 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 GKAP1Q5VSY0 366 aaPredicted RBP16.42■□□□□ 0.22
CNN3-207ENST00000545882 CPLX4Q7Z7G2 160 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 UHMK1Q8TAS1 419 aaKnown RBP16.42■□□□□ 0.22
CNN3-207ENST00000545882 EPS8L3Q8TE67 593 aaKnown RBP16.42■□□□□ 0.22
CNN3-207ENST00000545882 SHC3Q92529 594 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 JPH2Q9BR39 696 aaPredicted RBP16.42■□□□□ 0.22
CNN3-207ENST00000545882 NUP85Q9BW27 656 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 ST6GALNAC4Q9H4F1 302 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 COL4A5P29400 1685 aa16.42■□□□□ 0.22
CNN3-207ENST00000545882 TP73O15350 636 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 RIPK2O43353 540 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 FGFR4P22455 802 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 MXI1P50539 228 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 ZNF568Q3ZCX4 644 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 FAM160B2Q86V87 743 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 ZNF564Q8TBZ8 553 aaPredicted RBP16.41■□□□□ 0.22
CNN3-207ENST00000545882 PSPC1Q8WXF1 523 aaKnown RBP16.41■□□□□ 0.22
CNN3-207ENST00000545882 GMLQ99445 158 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 POP1Q99575 1024 aaKnown RBP16.41■□□□□ 0.22
CNN3-207ENST00000545882 AGO4Q9HCK5 861 aaKnown RBP16.41■□□□□ 0.22
CNN3-207ENST00000545882 GPRC5CQ9NQ84 441 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 KLC4Q9NSK0 619 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 GOLGA6L7A0A1B0GV03 622 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 SMIM23A6NLE4 172 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 SLC16A4O15374 487 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 RGS16O15492 202 aaPredicted RBP16.41■□□□□ 0.22
CNN3-207ENST00000545882 ADSSP30520 456 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 GBP1P32455 592 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 PTGER2P43116 358 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 NCKAP1LP55160 1127 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 MRPS9P82933 396 aaKnown RBP16.41■□□□□ 0.22
CNN3-207ENST00000545882 MAP2K1Q02750 393 aaPredicted RBP16.41■□□□□ 0.22
CNN3-207ENST00000545882 UGCGQ16739 394 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 TBC1D10BQ4KMP7 808 aaPredicted RBP16.41■□□□□ 0.22
CNN3-207ENST00000545882 CBWD2Q8IUF1 395 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 C12orf50Q8NA57 414 aaPredicted RBP16.41■□□□□ 0.22
CNN3-207ENST00000545882 HELQQ8TDG4 1101 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 IPO4Q8TEX9 1081 aaKnown RBP16.41■□□□□ 0.22
CNN3-207ENST00000545882 FAM151AQ8WW52 585 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 CLEC4DQ8WXI8 215 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 CCDC114Q96M63 670 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 SELENOSQ9BQE4 189 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 MTFR1LQ9H019 292 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 ZNF70Q9UC06 446 aaPredicted RBP16.41■□□□□ 0.22
CNN3-207ENST00000545882 PARP2Q9UGN5 583 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 FEM1BQ9UK73 627 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 UBIAD1Q9Y5Z9 338 aa16.41■□□□□ 0.22
CNN3-207ENST00000545882 NFIBO00712 420 aa16.4■□□□□ 0.22
CNN3-207ENST00000545882 GRIN3BO60391 1043 aa16.4■□□□□ 0.22
CNN3-207ENST00000545882 LYPLA2O95372 231 aa16.4■□□□□ 0.22
CNN3-207ENST00000545882 AGTP01019 485 aa16.4■□□□□ 0.22
CNN3-207ENST00000545882 RARGP13631 454 aa16.4■□□□□ 0.22
CNN3-207ENST00000545882 CYP11B1P15538 503 aa16.4■□□□□ 0.22
CNN3-207ENST00000545882 CAP2P40123 477 aa16.4■□□□□ 0.22
CNN3-207ENST00000545882 SCTRP47872 440 aa16.4■□□□□ 0.22
CNN3-207ENST00000545882 ADCY2Q08462 1091 aa16.4■□□□□ 0.22
CNN3-207ENST00000545882 AUHQ13825 339 aaKnown RBP16.4■□□□□ 0.22
CNN3-207ENST00000545882 TKFCQ3LXA3 575 aa16.4■□□□□ 0.22
CNN3-207ENST00000545882 C6orf118Q5T5N4 469 aa16.4■□□□□ 0.22
CNN3-207ENST00000545882 RSBN1LQ6PCB5 846 aaPredicted RBP16.4■□□□□ 0.22
CNN3-207ENST00000545882 PIGWQ7Z7B1 504 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms