RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 PSMA2P25787 234 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 SARSP49591 514 aaKnown RBP9.1□□□□□ -0.95
ATXN3-216ENST00000545170 ICA1Q05084 483 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 PPARAQ07869 468 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 ATG14Q6ZNE5 492 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 FANCBQ8NB91 859 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 C1orf54Q8WWF1 131 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.1□□□□□ -0.95
ATXN3-216ENST00000545170 TMEM79Q9BSE2 394 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 SNX12Q9UMY4 172 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 ABCC5O15440 1437 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 THOC7Q6I9Y2 204 aaKnown RBP9.1□□□□□ -0.95
ATXN3-216ENST00000545170 NEK10Q6ZWH5 1172 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 TRIM51Q9BSJ1 452 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 IARS2Q9NSE4 1012 aaKnown RBP9.1□□□□□ -0.95
ATXN3-216ENST00000545170 ATXN10Q9UBB4 475 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 SAC3D1A6NKF1 404 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 IRS4O14654 1257 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-216ENST00000545170 PDE9AO76083 593 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 ATXN8OSP0DMR3 200 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 ATF4P18848 351 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-216ENST00000545170 ARPP19P56211 112 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 CYP4A11Q02928 519 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 PDZK1Q5T2W1 519 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 CYP4A22Q5TCH4 519 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 RESP18Q5W5W9 173 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 SDE2Q6IQ49 451 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 RBM41Q96IZ5 413 aaKnown RBP9.1□□□□□ -0.95
ATXN3-216ENST00000545170 ATP8A2Q9NTI2 1148 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 FRMPD2Q68DX3 1309 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-216ENST00000545170 PIK3C2GO75747 1445 aa9.1□□□□□ -0.95
ATXN3-216ENST00000545170 RAD51BO15315 384 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 KLHL41O60662 606 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 YWHABP31946 246 aaKnown RBP9.09□□□□□ -0.95
ATXN3-216ENST00000545170 ABCE1P61221 599 aaKnown RBP9.09□□□□□ -0.95
ATXN3-216ENST00000545170 ABATP80404 500 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 FASTKD1Q53R41 847 aaKnown RBP9.09□□□□□ -0.95
ATXN3-216ENST00000545170 EDC3Q96F86 508 aaKnown RBP9.09□□□□□ -0.95
ATXN3-216ENST00000545170 SMAD5Q99717 465 aaKnown RBP9.09□□□□□ -0.95
ATXN3-216ENST00000545170 MANSC1Q9H8J5 431 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 IL1RL2Q9HB29 575 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 ITM2BQ9Y287 266 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 KIF21AQ7Z4S6 1674 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 ZNF862O60290 1169 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 SRGAP2CP0DJJ0 459 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 COPAP53621 1224 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 XKR9Q5GH70 373 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 C11orf88Q6PI97 169 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 ATXN7L3BQ96GX2 97 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 C17orf80Q9BSJ5 609 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 MLPHQ9BV36 600 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-216ENST00000545170 IRX2Q9BZI1 471 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-216ENST00000545170 MOSPD1Q9UJG1 213 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 CARD8Q9Y2G2 431 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 TELO2Q9Y4R8 837 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 MAP3K5Q99683 1374 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 PIPSLA2A3N6 862 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 LAD1O00515 517 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 GGPS1O95749 300 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 PTPN12Q05209 780 aaKnown RBP9.09□□□□□ -0.95
ATXN3-216ENST00000545170 RASGRF1Q13972 1273 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 NR1D2Q14995 579 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 CDO1Q16878 200 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 TRIQKQ629K1 86 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 MARCH10Q8NA82 808 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-216ENST00000545170 ENKURQ8TC29 256 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 PACSIN1Q9BY11 444 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 ZCWPW1Q9H0M4 648 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 CCSER2Q9H7U1 834 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 LRCH1Q9Y2L9 728 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 ADCY6O43306 1168 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 MED7O43513 233 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 CLASP2O75122 1294 aaKnown RBP9.09□□□□□ -0.95
ATXN3-216ENST00000545170 ZAP70P43403 619 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 NUDT2P50583 147 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 GPC5P78333 572 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 TRAF2Q12933 501 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 CBX3Q13185 183 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 ODR4Q5SWX8 454 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 RRM2BQ7LG56 351 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 IFNEQ86WN2 208 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 UXS1Q8NBZ7 420 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 EPS8L2Q9H6S3 715 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 KCNG1Q9UIX4 513 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 JAK1P23458 1154 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 CSE1LP55060 971 aaKnown RBP9.09□□□□□ -0.95
ATXN3-216ENST00000545170 P3H1Q32P28 736 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 TAF8Q7Z7C8 310 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 DIS3LQ8TF46 1054 aaKnown RBP9.09□□□□□ -0.95
ATXN3-216ENST00000545170 NUP85Q9BW27 656 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 RERGLQ9H628 205 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 CASS4Q9NQ75 786 aa9.09□□□□□ -0.95
ATXN3-216ENST00000545170 LARGE1O95461 756 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 MYL1P05976 194 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 POTEIP0CG38 1075 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 TYK2P29597 1187 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 IRGCQ6NXR0 463 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 HPS1Q92902 700 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 PPP2R3CQ969Q6 453 aa9.08□□□□□ -0.96
ATXN3-216ENST00000545170 ZNF594Q96JF6 807 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms