RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 SMRP1Q8NCR6 262 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 VN1R2Q8NFZ6 395 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 SNX21Q969T3 373 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 ZFP42Q96MM3 310 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 TMEM134Q9H6X4 195 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 KCND2Q9NZV8 630 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 PARP2Q9UGN5 583 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 PHLPP2Q6ZVD8 1323 aa18.66■□□□□ 0.58
HOXD8-204ENST00000544999 CCDC169A6NNP5 214 aa18.65■□□□□ 0.58
HOXD8-204ENST00000544999 K7ERI5 159 aa18.65■□□□□ 0.58
HOXD8-204ENST00000544999 CXCL14O95715 111 aa18.65■□□□□ 0.58
HOXD8-204ENST00000544999 EDN1P05305 212 aa18.65■□□□□ 0.58
HOXD8-204ENST00000544999 NPTX2P47972 431 aa18.65■□□□□ 0.58
HOXD8-204ENST00000544999 RESTQ13127 1097 aa18.65■□□□□ 0.58
HOXD8-204ENST00000544999 GSTCDQ8NEC7 633 aa18.65■□□□□ 0.58
HOXD8-204ENST00000544999 CALML4Q96GE6 196 aa18.65■□□□□ 0.58
HOXD8-204ENST00000544999 PLIN2Q99541 437 aa18.65■□□□□ 0.58
HOXD8-204ENST00000544999 IRAK3Q9Y616 596 aa18.65■□□□□ 0.58
HOXD8-204ENST00000544999 SSBP05455 408 aaKnown RBP eCLIP18.64■□□□□ 0.57
HOXD8-204ENST00000544999 PLA2G4BP0C869 781 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 CA8P35219 290 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 UBA7P41226 1012 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 OR1G1P47890 313 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 SLC12A3P55017 1021 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 RBM10P98175 930 aaKnown RBP18.64■□□□□ 0.57
HOXD8-204ENST00000544999 GRIK3Q13003 919 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 DCAF4L1Q3SXM0 396 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 NT5DC1Q5TFE4 455 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 ADHFE1Q8IWW8 467 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 GJD3Q8N144 294 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 CASP10Q92851 521 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 RPS6KC1Q96S38 1066 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 VN1R3Q9BXE9 311 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 CD320Q9NPF0 282 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 KMT5AQ9NQR1 393 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 MARCH5Q9NX47 278 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 KLK14Q9P0G3 267 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 ARHGAP28Q9P2N2 729 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 KCNG1Q9UIX4 513 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 USP20Q9Y2K6 914 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 RBM19Q9Y4C8 960 aaKnown RBP18.64■□□□□ 0.57
HOXD8-204ENST00000544999 MYH11P35749 1972 aa18.64■□□□□ 0.57
HOXD8-204ENST00000544999 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.63■□□□□ 0.57
HOXD8-204ENST00000544999 CLASP2O75122 1294 aaKnown RBP18.63■□□□□ 0.57
HOXD8-204ENST00000544999 NR1I2O75469 434 aa18.63■□□□□ 0.57
HOXD8-204ENST00000544999 GRIN1Q05586 938 aa18.63■□□□□ 0.57
HOXD8-204ENST00000544999 ZP2Q05996 745 aa18.63■□□□□ 0.57
HOXD8-204ENST00000544999 PTPAQ15257 358 aa18.63■□□□□ 0.57
HOXD8-204ENST00000544999 ATF7IP2Q5U623 682 aa18.63■□□□□ 0.57
HOXD8-204ENST00000544999 EEF1DP3Q658K8 133 aa18.63■□□□□ 0.57
HOXD8-204ENST00000544999 ANKRD54Q6NXT1 300 aa18.63■□□□□ 0.57
HOXD8-204ENST00000544999 APBB1IPQ7Z5R6 666 aaPredicted RBP18.63■□□□□ 0.57
HOXD8-204ENST00000544999 SNTG2Q9NY99 539 aa18.63■□□□□ 0.57
HOXD8-204ENST00000544999 MTMR6Q9Y217 621 aa18.63■□□□□ 0.57
HOXD8-204ENST00000544999 TNFSF13BQ9Y275 285 aa18.63■□□□□ 0.57
HOXD8-204ENST00000544999 PRG3Q9Y2Y8 225 aaPredicted RBP18.63■□□□□ 0.57
HOXD8-204ENST00000544999 CLIC4Q9Y696 253 aa18.63■□□□□ 0.57
HOXD8-204ENST00000544999 NCOR1O75376 2440 aa18.63■□□□□ 0.57
HOXD8-204ENST00000544999 C19orf67A6NJJ6 358 aa18.62■□□□□ 0.57
HOXD8-204ENST00000544999 SOD2P04179 222 aa18.62■□□□□ 0.57
HOXD8-204ENST00000544999 SSTR3P32745 418 aaPredicted RBP18.62■□□□□ 0.57
HOXD8-204ENST00000544999 LLGL2Q6P1M3 1020 aa18.62■□□□□ 0.57
HOXD8-204ENST00000544999 TMEM87AQ8NBN3 555 aa18.62■□□□□ 0.57
HOXD8-204ENST00000544999 SPIRE2Q8WWL2 714 aa18.62■□□□□ 0.57
HOXD8-204ENST00000544999 AUTS2Q8WXX7 1259 aa18.62■□□□□ 0.57
HOXD8-204ENST00000544999 POP1Q99575 1024 aaKnown RBP18.62■□□□□ 0.57
HOXD8-204ENST00000544999 NTPCRQ9BSD7 190 aaKnown RBP18.62■□□□□ 0.57
HOXD8-204ENST00000544999 HERC2P3Q9BVR0 1158 aa18.62■□□□□ 0.57
HOXD8-204ENST00000544999 COLEC11Q9BWP8 271 aa18.62■□□□□ 0.57
HOXD8-204ENST00000544999 ZSCAN16Q9H4T2 348 aaPredicted RBP18.62■□□□□ 0.57
HOXD8-204ENST00000544999 HCFC2Q9Y5Z7 792 aa18.62■□□□□ 0.57
HOXD8-204ENST00000544999 SFI1A8K8P3 1242 aa18.61■□□□□ 0.57
HOXD8-204ENST00000544999 STX6O43752 255 aa18.61■□□□□ 0.57
HOXD8-204ENST00000544999 RECQL4O94761 1208 aa18.61■□□□□ 0.57
HOXD8-204ENST00000544999 PLS3P13797 630 aa18.61■□□□□ 0.57
HOXD8-204ENST00000544999 HOXB8P17481 243 aaPredicted RBP18.61■□□□□ 0.57
HOXD8-204ENST00000544999 RAD51AP2Q09MP3 1159 aa18.61■□□□□ 0.57
HOXD8-204ENST00000544999 PTPN14Q15678 1187 aa18.61■□□□□ 0.57
HOXD8-204ENST00000544999 TAS1R3Q7RTX0 852 aa18.61■□□□□ 0.57
HOXD8-204ENST00000544999 HSCBQ8IWL3 235 aa18.61■□□□□ 0.57
HOXD8-204ENST00000544999 RNF168Q8IYW5 571 aaPredicted RBP18.61■□□□□ 0.57
HOXD8-204ENST00000544999 ACO2Q99798 780 aaKnown RBP18.61■□□□□ 0.57
HOXD8-204ENST00000544999 MRPL4Q9BYD3 311 aaKnown RBP18.61■□□□□ 0.57
HOXD8-204ENST00000544999 CCSER1Q9C0I3 900 aa18.61■□□□□ 0.57
HOXD8-204ENST00000544999 BLOC1S4Q9NUP1 217 aa18.61■□□□□ 0.57
HOXD8-204ENST00000544999 SSX2IPQ9Y2D8 614 aa18.61■□□□□ 0.57
HOXD8-204ENST00000544999 USP15Q9Y4E8 981 aaPredicted RBP18.61■□□□□ 0.57
HOXD8-204ENST00000544999 SLC16A4O15374 487 aa18.6■□□□□ 0.57
HOXD8-204ENST00000544999 EFEMP2O95967 443 aa18.6■□□□□ 0.57
HOXD8-204ENST00000544999 PLCG1P19174 1290 aa18.6■□□□□ 0.57
HOXD8-204ENST00000544999 SMTNP53814 917 aa18.6■□□□□ 0.57
HOXD8-204ENST00000544999 KARSQ15046 597 aaKnown RBP18.6■□□□□ 0.57
HOXD8-204ENST00000544999 ARSHQ5FYA8 562 aa18.6■□□□□ 0.57
HOXD8-204ENST00000544999 FAM173BQ6P4H8 233 aa18.6■□□□□ 0.57
HOXD8-204ENST00000544999 SYCE2Q6PIF2 218 aa18.6■□□□□ 0.57
HOXD8-204ENST00000544999 RASSF8Q8NHQ8 419 aa18.6■□□□□ 0.57
HOXD8-204ENST00000544999 LRRC15Q8TF66 581 aa18.6■□□□□ 0.57
HOXD8-204ENST00000544999 SUSD6Q92537 303 aa18.6■□□□□ 0.57
HOXD8-204ENST00000544999 EMILIN2Q9BXX0 1053 aa18.6■□□□□ 0.57
HOXD8-204ENST00000544999 S1PR5Q9H228 398 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms