RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 REEP2Q9BRK0 252 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 COL25A1Q9BXS0 654 aaPredicted RBP17.29■□□□□ 0.36
CCDC78-216ENST00000544996 DNAJB4Q9UDY4 337 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 STK39Q9UEW8 545 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 TNFSF13BQ9Y275 285 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 USP20Q9Y2K6 914 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 FAN1Q9Y2M0 1017 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 UNC80Q8N2C7 3258 aa17.29■□□□□ 0.36
CCDC78-216ENST00000544996 FSCN2O14926 492 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 PPP6R2O75170 966 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 TBCAO75347 108 aaKnown RBP17.28■□□□□ 0.36
CCDC78-216ENST00000544996 YEATS4O95619 227 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 EDN1P05305 212 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 SCP2P22307 547 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 NRIP1P48552 1158 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 SLC11A1P49279 550 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 SCNN1GP51170 649 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 KCNQ1P51787 676 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
CCDC78-216ENST00000544996 SMC1AQ14683 1233 aaKnown RBP17.28■□□□□ 0.36
CCDC78-216ENST00000544996 LEXMQ3ZCV2 418 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 PLPP4Q5VZY2 271 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 ATL3Q6DD88 541 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 RBM23Q86U06 439 aaKnown RBP17.28■□□□□ 0.36
CCDC78-216ENST00000544996 MYCT1Q8N699 235 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 CDCA3Q99618 268 aaPredicted RBP17.28■□□□□ 0.36
CCDC78-216ENST00000544996 TCHPQ9BT92 498 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 ZHX3Q9H4I2 956 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 PARVGQ9HBI0 331 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 SNTG2Q9NY99 539 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 KLK14Q9P0G3 267 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 PCDHGC5Q9Y5F6 944 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 KIAA1671Q9BY89 1806 aa17.28■□□□□ 0.36
CCDC78-216ENST00000544996 BMP1P13497 986 aa17.27■□□□□ 0.36
CCDC78-216ENST00000544996 GRIK3Q13003 919 aa17.27■□□□□ 0.36
CCDC78-216ENST00000544996 GIT2Q14161 759 aa17.27■□□□□ 0.36
CCDC78-216ENST00000544996 BECN1Q14457 450 aa17.27■□□□□ 0.36
CCDC78-216ENST00000544996 CTC1Q2NKJ3 1217 aa17.27■□□□□ 0.36
CCDC78-216ENST00000544996 PUS10Q3MIT2 529 aaKnown RBP17.27■□□□□ 0.36
CCDC78-216ENST00000544996 FOXD4L6Q3SYB3 417 aaPredicted RBP17.27■□□□□ 0.36
CCDC78-216ENST00000544996 EEF1DP3Q658K8 133 aa17.27■□□□□ 0.36
CCDC78-216ENST00000544996 FOXD4L3Q6VB84 417 aaPredicted RBP17.27■□□□□ 0.36
CCDC78-216ENST00000544996 ADGRD2Q7Z7M1 963 aa17.27■□□□□ 0.36
CCDC78-216ENST00000544996 DDX53Q86TM3 631 aaKnown RBP17.27■□□□□ 0.36
CCDC78-216ENST00000544996 VPS52Q8N1B4 723 aa17.27■□□□□ 0.36
CCDC78-216ENST00000544996 EFHBQ8N7U6 833 aa17.27■□□□□ 0.36
CCDC78-216ENST00000544996 TMEM161BQ8NDZ6 487 aa17.27■□□□□ 0.36
CCDC78-216ENST00000544996 LRRC15Q8TF66 581 aa17.27■□□□□ 0.36
CCDC78-216ENST00000544996 ACO2Q99798 780 aaKnown RBP17.27■□□□□ 0.36
CCDC78-216ENST00000544996 CFAP45Q9UL16 551 aa17.27■□□□□ 0.36
CCDC78-216ENST00000544996 H3BQ06 376 aaPredicted RBP17.26■□□□□ 0.35
CCDC78-216ENST00000544996 NRP1O14786 923 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 B4GALT3O60512 393 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 RECQL4O94761 1208 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 MAPTP10636 758 aaKnown RBP17.26■□□□□ 0.35
CCDC78-216ENST00000544996 CA8P35219 290 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 GTF2F1P35269 517 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCDC78-216ENST00000544996 STAT6P42226 847 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 OR1G1P47890 313 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 NDUFV1P49821 464 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 ZNF131P52739 623 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 DSC1Q08554 894 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 ADAM15Q13444 863 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 ZNF568Q3ZCX4 644 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 SV2BQ7L1I2 683 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 TAS1R3Q7RTX0 852 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 TMEM173Q86WV6 379 aaPredicted RBP17.26■□□□□ 0.35
CCDC78-216ENST00000544996 COLGALT2Q8IYK4 626 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 MRPL43Q8N983 215 aaKnown RBP17.26■□□□□ 0.35
CCDC78-216ENST00000544996 TMEM87AQ8NBN3 555 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 KCNG4Q8TDN1 519 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 ADAMTS19Q8TE59 1207 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 TARS2Q9BW92 718 aaKnown RBP17.26■□□□□ 0.35
CCDC78-216ENST00000544996 MIOSQ9NXC5 875 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 FAM50BQ9Y247 325 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 GDAQ9Y2T3 454 aa17.26■□□□□ 0.35
CCDC78-216ENST00000544996 PER2O15055 1255 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 TRAK2O60296 914 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 CUTAO60888 179 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 CXCL14O95715 111 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 SRGAP2BP0DMP2 458 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 ABCD1P33897 745 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 YARSP54577 528 aaKnown RBP17.25■□□□□ 0.35
CCDC78-216ENST00000544996 NCKAP1LP55160 1127 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 PKP1Q13835 747 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 DUSP6Q16828 381 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 ZPBP2Q6X784 338 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 HAUS6Q7Z4H7 955 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 GSTCDQ8NEC7 633 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 CCDC94Q9BW85 323 aaPredicted RBP17.25■□□□□ 0.35
CCDC78-216ENST00000544996 COLEC11Q9BWP8 271 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 PANK2Q9BZ23 570 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 PTPRHQ9HD43 1115 aa17.25■□□□□ 0.35
CCDC78-216ENST00000544996 PRG3Q9Y2Y8 225 aaPredicted RBP17.25■□□□□ 0.35
CCDC78-216ENST00000544996 HIDE1A8MVS5 230 aa17.24■□□□□ 0.35
CCDC78-216ENST00000544996 K7ENM7 598 aa17.24■□□□□ 0.35
CCDC78-216ENST00000544996 LINC01565O15544 149 aa17.24■□□□□ 0.35
CCDC78-216ENST00000544996 TOM1L1O75674 476 aa17.24■□□□□ 0.35
CCDC78-216ENST00000544996 THP07101 528 aa17.24■□□□□ 0.35
CCDC78-216ENST00000544996 MCF2P10911 925 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms