RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 ZNF598Q86UK7 904 aaKnown RBP12.85□□□□□ -0.35
SNHG1-221ENST00000544983 HERC6Q8IVU3 1022 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 HPS3Q969F9 1004 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 CCDC94Q9BW85 323 aaPredicted RBP12.85□□□□□ -0.35
SNHG1-221ENST00000544983 KIAA1586Q9HCI6 787 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 TOPORSQ9NS56 1045 aaPredicted RBP12.85□□□□□ -0.35
SNHG1-221ENST00000544983 CXXC1Q9P0U4 656 aaPredicted RBP12.85□□□□□ -0.35
SNHG1-221ENST00000544983 GIT1Q9Y2X7 761 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 IPPQ9Y573 584 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 INSL6Q9Y581 213 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.85□□□□□ -0.35
SNHG1-221ENST00000544983 TRIOBPQ9H2D6 2365 aa12.85□□□□□ -0.35
SNHG1-221ENST00000544983 RANBP2P49792 3224 aaKnown RBP12.84□□□□□ -0.35
SNHG1-221ENST00000544983 TTLL13PA6NNM8 815 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 ABLIM1O14639 778 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 PSMA7O14818 248 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 OGTO15294 1046 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 INPPL1O15357 1258 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 NPTXRO95502 500 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 EDN1P05305 212 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 CLTAP09496 248 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 ITGA4P13612 1032 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 GRM5P41594 1212 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 MATR3P43243 847 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNHG1-221ENST00000544983 LRIT3Q3SXY7 679 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 CT47A1Q5JQC4 288 aaPredicted RBP12.84□□□□□ -0.35
SNHG1-221ENST00000544983 GLB1LQ6UWU2 654 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNHG1-221ENST00000544983 C12orf56Q8IXR9 622 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 ABI1Q8IZP0 508 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 MLKLQ8NB16 471 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 POMGNT1Q8WZA1 660 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 DHTKD1Q96HY7 919 aaPredicted RBP12.84□□□□□ -0.35
SNHG1-221ENST00000544983 TSPAN18Q96SJ8 248 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 RAD9AQ99638 391 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 EIF2AQ9BY44 585 aaKnown RBP12.84□□□□□ -0.35
SNHG1-221ENST00000544983 FGFBP2Q9BYJ0 223 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 CDT1Q9H211 546 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 TYW1Q9NV66 732 aaKnown RBP12.84□□□□□ -0.35
SNHG1-221ENST00000544983 KANSL3Q9P2N6 904 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 ANKFY1Q9P2R3 1169 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 MAN1B1Q9UKM7 699 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 SZT2Q5T011 3432 aa12.84□□□□□ -0.35
SNHG1-221ENST00000544983 CALUO43852 315 aaPredicted RBP12.83□□□□□ -0.36
SNHG1-221ENST00000544983 DGKIO75912 1065 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 RPL13P26373 211 aaKnown RBP12.83□□□□□ -0.36
SNHG1-221ENST00000544983 HOXD13P35453 343 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 YARSP54577 528 aaKnown RBP12.83□□□□□ -0.36
SNHG1-221ENST00000544983 DEFB103AP81534 67 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 HTRA4P83105 476 aaPredicted RBP12.83□□□□□ -0.36
SNHG1-221ENST00000544983 SMAD3P84022 425 aaKnown RBP12.83□□□□□ -0.36
SNHG1-221ENST00000544983 KCNA1Q09470 495 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 RAB30Q15771 203 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 NFIL3Q16649 462 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 EEF1DP3Q658K8 133 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 ARMCX5Q6P1M9 558 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 SLC39A4Q6P5W5 647 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 SLC9A9Q8IVB4 645 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 ADSSL1Q8N142 457 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 SMG8Q8ND04 991 aaKnown RBP12.83□□□□□ -0.36
SNHG1-221ENST00000544983 GLIS3Q8NEA6 775 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
SNHG1-221ENST00000544983 ACAP3Q96P50 834 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 YME1L1Q96TA2 773 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 MSTO1Q9BUK6 570 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 MRPL9Q9BYD2 267 aaKnown RBP12.83□□□□□ -0.36
SNHG1-221ENST00000544983 TMEM117Q9H0C3 514 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 KCTD10Q9H3F6 313 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 RSAD1Q9HA92 442 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 PLEKHA5Q9HAU0 1116 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 AGPAT3Q9NRZ7 376 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 DACH1Q9UI36 760 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 AGO2Q9UKV8 859 aaKnown RBP12.83□□□□□ -0.36
SNHG1-221ENST00000544983 TRAF3IP3Q9Y228 551 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 GDAQ9Y2T3 454 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 PCDHA11Q9Y5I1 949 aa12.83□□□□□ -0.36
SNHG1-221ENST00000544983 ANKRD63C9JTQ0 380 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 TGFB1I1O43294 461 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 TLL1O43897 1013 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 ATF7P17544 494 aaPredicted RBP12.82□□□□□ -0.36
SNHG1-221ENST00000544983 ADSSP30520 456 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 PRCPP42785 496 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 LRRC63Q05C16 580 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 EDRF1Q3B7T1 1238 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 CENPPQ6IPU0 288 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 CD302Q8IX05 232 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 NELFCDQ8IXH7 590 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 CMTR2Q8IYT2 770 aaKnown RBP12.82□□□□□ -0.36
SNHG1-221ENST00000544983 URGCPQ8TCY9 931 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 ZNF689Q96CS4 500 aaPredicted RBP12.82□□□□□ -0.36
SNHG1-221ENST00000544983 ZBTB45Q96K62 511 aaPredicted RBP12.82□□□□□ -0.36
SNHG1-221ENST00000544983 TSG101Q99816 390 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 NXF3Q9H4D5 531 aaKnown RBP12.82□□□□□ -0.36
SNHG1-221ENST00000544983 MSRAQ9UJ68 235 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 USP20Q9Y2K6 914 aa12.82□□□□□ -0.36
SNHG1-221ENST00000544983 COL4A6Q14031 1691 aa12.81□□□□□ -0.36
SNHG1-221ENST00000544983 BICDL2A1A5D9 508 aa12.81□□□□□ -0.36
SNHG1-221ENST00000544983 BIN1O00499 593 aa12.81□□□□□ -0.36
SNHG1-221ENST00000544983 EXTL3O43909 919 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms