RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 GINS2Q9Y248 185 aa7.91□□□□□ -1.14
CIT-215ENST00000544800 SLC4A4Q9Y6R1 1079 aa7.91□□□□□ -1.14
CIT-215ENST00000544800 MTORP42345 2549 aa7.91□□□□□ -1.14
CIT-215ENST00000544800 KNTC1P50748 2209 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 ABCB11O95342 1321 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 CLEC18AA5D8T8 446 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 TLX3O43711 291 aaPredicted RBP7.9□□□□□ -1.14
CIT-215ENST00000544800 XYLBO75191 536 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 PRDM1O75626 825 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 SOD2P04179 222 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 TSPY3P0CV98 308 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 TSPY8P0CW00 308 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 NDUFV2P19404 249 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 CCINQ13939 588 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 GRM2Q14416 872 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 PREPLQ4J6C6 727 aaPredicted RBP7.9□□□□□ -1.14
CIT-215ENST00000544800 WDR44Q5JSH3 913 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 HIST2H2BCQ6DN03 193 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 CLEC18BQ6UXF7 455 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 MRPL50Q8N5N7 158 aaKnown RBP7.9□□□□□ -1.14
CIT-215ENST00000544800 CLEC18CQ8NCF0 446 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 TMEM40Q8WWA1 233 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 TTC9Q92623 222 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 GPKOWQ92917 476 aaPredicted RBP eCLIP7.9□□□□□ -1.14
CIT-215ENST00000544800 ZBTB10Q96DT7 871 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 APOL6Q9BWW8 343 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 C8orf33Q9H7E9 229 aaPredicted RBP7.9□□□□□ -1.14
CIT-215ENST00000544800 NRDE2Q9H7Z3 1164 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 LRRC4CQ9HCJ2 640 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 ERAP1Q9NZ08 941 aa7.9□□□□□ -1.14
CIT-215ENST00000544800 NUP205Q92621 2012 aa7.9□□□□□ -1.15
CIT-215ENST00000544800 PLIN4Q96Q06 1357 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 SMIM35A0A1B0GVV1 85 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 ZNF862O60290 1169 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 ZSCAN20P17040 1043 aaPredicted RBP7.89□□□□□ -1.15
CIT-215ENST00000544800 GDI1P31150 447 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 SLC11A1P49279 550 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 USH1GQ495M9 461 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 ZNF598Q86UK7 904 aaKnown RBP7.89□□□□□ -1.15
CIT-215ENST00000544800 MARCH9Q86YJ5 346 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 TNPO1Q92973 898 aaKnown RBP7.89□□□□□ -1.15
CIT-215ENST00000544800 ZDHHC16Q969W1 377 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 MCRS1Q96EZ8 462 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 PDCD2LQ9BRP1 358 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 GTPBP2Q9BX10 602 aaKnown RBP7.89□□□□□ -1.15
CIT-215ENST00000544800 FZD8Q9H461 694 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 ZFP14Q9HCL3 533 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 EBF1Q9UH73 591 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 PCDHA1Q9Y5I3 950 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 OTOGQ6ZRI0 2925 aa7.89□□□□□ -1.15
CIT-215ENST00000544800 BAZ2AQ9UIF9 1905 aaKnown RBP7.89□□□□□ -1.15
CIT-215ENST00000544800 ABCA7Q8IZY2 2146 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 PTPRBP23467 1997 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 A0A0U1RQF3 1178 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 BLACEA4D250 179 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 GOLGA8CPA6NN73 597 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 MINDY4BA8MYZ0 360 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 ZNF263O14978 683 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 INSRRP14616 1297 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 PSMC3P17980 439 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 TNFRSF8P28908 595 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 DPP6P42658 865 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 DHPSP49366 369 aaPredicted RBP7.88□□□□□ -1.15
CIT-215ENST00000544800 GLUD2P49448 558 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 TFAP4Q01664 338 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 GFPT1Q06210 699 aaPredicted RBP7.88□□□□□ -1.15
CIT-215ENST00000544800 NFATC3Q12968 1075 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 NBR1Q14596 966 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 C6orf132Q5T0Z8 1188 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 FAM228AQ86W67 206 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 SYT12Q8IV01 421 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 SNIP1Q8TAD8 396 aaKnown RBP7.88□□□□□ -1.15
CIT-215ENST00000544800 FAM200AQ8TCP9 573 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 CSGALNACT1Q8TDX6 532 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 ING5Q8WYH8 240 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 NXPE2Q96DL1 559 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 POM121Q96HA1 1249 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 DNAAF2Q9NVR5 837 aaKnown RBP7.88□□□□□ -1.15
CIT-215ENST00000544800 SLC6A14Q9UN76 642 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 STX8Q9UNK0 236 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 MTMR7Q9Y216 660 aa7.88□□□□□ -1.15
CIT-215ENST00000544800 ICE1Q9Y2F5 2266 aa7.87□□□□□ -1.15
CIT-215ENST00000544800 NID2Q14112 1375 aa7.87□□□□□ -1.15
CIT-215ENST00000544800 DOCK6Q96HP0 2047 aa7.87□□□□□ -1.15
CIT-215ENST00000544800 BHMG1C9JSJ3 638 aaPredicted RBP7.87□□□□□ -1.15
CIT-215ENST00000544800 TNFRSF10BO14763 440 aa7.87□□□□□ -1.15
CIT-215ENST00000544800 ALDH2P05091 517 aa7.87□□□□□ -1.15
CIT-215ENST00000544800 C8AP07357 584 aa7.87□□□□□ -1.15
CIT-215ENST00000544800 KRT10P13645 584 aa7.87□□□□□ -1.15
CIT-215ENST00000544800 FCARP24071 287 aa7.87□□□□□ -1.15
CIT-215ENST00000544800 MARK3P27448 753 aa7.87□□□□□ -1.15
CIT-215ENST00000544800 HOXA9P31269 272 aa7.87□□□□□ -1.15
CIT-215ENST00000544800 TCF7P36402 384 aaPredicted RBP7.87□□□□□ -1.15
CIT-215ENST00000544800 KPNA1P52294 538 aaPredicted RBP7.87□□□□□ -1.15
CIT-215ENST00000544800 UCNP55089 124 aa7.87□□□□□ -1.15
CIT-215ENST00000544800 SEMG2Q02383 582 aa7.87□□□□□ -1.15
CIT-215ENST00000544800 KCNH2Q12809 1159 aa7.87□□□□□ -1.15
CIT-215ENST00000544800 PABPC1LQ4VXU2 614 aaKnown RBP7.87□□□□□ -1.15
CIT-215ENST00000544800 USP39Q53GS9 565 aaKnown RBP7.87□□□□□ -1.15
CIT-215ENST00000544800 PKN3Q6P5Z2 889 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms