RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	CDR2L	Q86X02	465 aa	Predicted RBP	13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	ZNF280B	Q86YH2	543 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	DAW1	Q8N136	415 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	KRI1	Q8N9T8	703 aa	Known RBP	13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	SPIRE2	Q8WWL2	714 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	ARHGAP28	Q9P2N2	729 aa		13.9	□□□□□ -0.18
CLPB-213	ENST00000544382	TBCA	O75347	108 aa	Known RBP	13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	FAM13A	O94988	1023 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	AKAP5	P24588	427 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	ABCD1	P33897	745 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	OR1G1	P47890	313 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	SCNN1G	P51170	649 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	GRIN1	Q05586	938 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	MAPK7	Q13164	816 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	ADAM15	Q13444	863 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	DHX8	Q14562	1220 aa	Known RBP	13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	SLC39A14	Q15043	492 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	DUSP6	Q16828	381 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	FAM173B	Q6P4H8	233 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	ADGRD2	Q7Z7M1	963 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	VPS52	Q8N1B4	723 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	LARP4B	Q92615	738 aa	Known RBP	13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	RAD54L	Q92698	747 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	ZFP42	Q96MM3	310 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	USP28	Q96RU2	1077 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	NTPCR	Q9BSD7	190 aa	Known RBP	13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	COLEC11	Q9BWP8	271 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	RNF39	Q9H2S5	420 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	DNAJB4	Q9UDY4	337 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	STK17A	Q9UEE5	414 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	CD207	Q9UJ71	328 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	FBXO2	Q9UK22	296 aa	Predicted RBP	13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	TNFSF13B	Q9Y275	285 aa		13.89	□□□□□ -0.19
CLPB-213	ENST00000544382	SFI1	A8K8P3	1242 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	TNFRSF10A	O00220	468 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	NRP1	O14786	923 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	SLC16A4	O15374	487 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	RECQL4	O94761	1208 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	DDHD2	O94830	711 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	CXCL14	O95715	111 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	ZSCAN22	P10073	491 aa	Predicted RBP	13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	NASP	P49321	788 aa	Predicted RBP	13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	AFF1	P51825	1210 aa	Known RBP	13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	MCM6	Q14566	821 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	ZNF568	Q3ZCX4	644 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	NT5DC1	Q5TFE4	455 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	RRAGB	Q5VZM2	374 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	CCDC73	Q6ZRK6	1079 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	COLGALT2	Q8IYK4	626 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	MRPL43	Q8N983	215 aa	Known RBP	13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	ACO2	Q99798	780 aa	Known RBP	13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	TCHP	Q9BT92	498 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	CCDC94	Q9BW85	323 aa	Predicted RBP	13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	PARVG	Q9HBI0	331 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	SNTG2	Q9NY99	539 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	KLK14	Q9P0G3	267 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	SSX2IP	Q9Y2D8	614 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	PCDHGC5	Q9Y5F6	944 aa		13.88	□□□□□ -0.19
CLPB-213	ENST00000544382	CIT	O14578	2027 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	GRXCR2	A6NFK2	248 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	TTLL13P	A6NNM8	815 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	PER2	O15055	1255 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	LINC01565	O15544	149 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	TBX10	O75333	385 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	TH	P07101	528 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	CTSA	P10619	480 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	DDIT3	P35638	169 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	YARS	P54577	528 aa	Known RBP	13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	DSC1	Q08554	894 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	SMAD4	Q13485	552 aa	Known RBP	13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	ARSH	Q5FYA8	562 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	SPECC1	Q5M775	1068 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	EEF1DP3	Q658K8	133 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	TMEM173	Q86WV6	379 aa	Predicted RBP	13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	MYCT1	Q8N699	235 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	BICD1	Q96G01	975 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	EPSTI1	Q96J88	318 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	REEP2	Q9BRK0	252 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	ZBP1	Q9H171	429 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	ZHX3	Q9H4I2	956 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	BLOC1S4	Q9NUP1	217 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	GDA	Q9Y2T3	454 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	MUC3A	Q02505	3323 aa		13.87	□□□□□ -0.19
CLPB-213	ENST00000544382	TRIP11	Q15643	1979 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	C2orf71	A6NGG8	1288 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	HIDE1	A8MVS5	230 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	SPTLC2	O15270	562 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	PPP6R2	O75170	966 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	YEATS4	O95619	227 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	F13A1	P00488	732 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	UROD	P06132	367 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	MAPT	P10636	758 aa	Known RBP	13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	MCF2	P10911	925 aa		13.86	□□□□□ -0.19
CLPB-213	ENST00000544382	LTBR	P36941	435 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms