RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 ZRSR1Q15695 479 aaKnown RBP7.9□□□□□ -1.14
NUP43-206ENST00000543637 FAM187BQ17R55 369 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 USP41Q3LFD5 358 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 LARP1BQ659C4 914 aaKnown RBP7.9□□□□□ -1.14
NUP43-206ENST00000543637 SYCE2Q6PIF2 218 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 POTEGQ6S5H5 508 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 CDR2LQ86X02 465 aaPredicted RBP7.9□□□□□ -1.14
NUP43-206ENST00000543637 COLGALT2Q8IYK4 626 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 KCTD17Q8N5Z5 321 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 VN1R2Q8NFZ6 395 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 SUSD6Q92537 303 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 PBXIP1Q96AQ6 731 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 ACSF2Q96CM8 615 aaPredicted RBP7.9□□□□□ -1.14
NUP43-206ENST00000543637 DRC1Q96MC2 740 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 KLHL5Q96PQ7 755 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 TCHPQ9BT92 498 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 NT5C3AQ9H0P0 336 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 KCNH6Q9H252 994 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 BHMT2Q9H2M3 363 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 FZD8Q9H461 694 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 GPRC5CQ9NQ84 441 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 TSHZ2Q9NRE2 1034 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 MIOSQ9NXC5 875 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 KLK14Q9P0G3 267 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 PRG3Q9Y2Y8 225 aaPredicted RBP7.9□□□□□ -1.14
NUP43-206ENST00000543637 RBM19Q9Y4C8 960 aaKnown RBP7.9□□□□□ -1.14
NUP43-206ENST00000543637 HES2Q9Y543 173 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 PCDHB6Q9Y5E3 794 aa7.9□□□□□ -1.14
NUP43-206ENST00000543637 TRANK1O15050 2925 aa7.9□□□□□ -1.15
NUP43-206ENST00000543637 MYO7AQ13402 2215 aa7.9□□□□□ -1.15
NUP43-206ENST00000543637 E9PMD0 336 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 ACKR2O00590 384 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 B4GALT5O43286 388 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 EPCAMP16422 314 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 SMTNP53814 917 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 YARSP54577 528 aaKnown RBP7.89□□□□□ -1.15
NUP43-206ENST00000543637 ZXDAP98168 799 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 CREMQ03060 361 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 STRN3Q13033 797 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 NBR1Q14596 966 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 PTPN14Q15678 1187 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 DCAF4L1Q3SXM0 396 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 PDXDC1Q6P996 788 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 TRIM67Q6ZTA4 783 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 SUGP1Q8IWZ8 645 aaKnown RBP7.89□□□□□ -1.15
NUP43-206ENST00000543637 C4orf32Q8N8J7 132 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 IGSF22Q8N9C0 903 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 TMX3Q96JJ7 454 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 FBXL18Q96ME1 805 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 ZFP42Q96MM3 310 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 HERC2P3Q9BVR0 1158 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 TIPINQ9BVW5 301 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 NXF3Q9H4D5 531 aaKnown RBP7.89□□□□□ -1.15
NUP43-206ENST00000543637 SFXN1Q9H9B4 322 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 C17orf75Q9HAS0 396 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 PIDD1Q9HB75 910 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 KMT5AQ9NQR1 393 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.89□□□□□ -1.15
NUP43-206ENST00000543637 SNTG2Q9NY99 539 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 RAPGEFL1Q9UHV5 662 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 ADAM28Q9UKQ2 775 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 UNC80Q8N2C7 3258 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 EYSQ5T1H1 3165 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 CHD7Q9P2D1 2997 aa7.89□□□□□ -1.15
NUP43-206ENST00000543637 MYO10Q9HD67 2058 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 CITO14578 2027 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 ZMYM2Q9UBW7 1377 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 PLXNA3P51805 1871 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 CCDC195A0A1B0GUA6 201 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 INPPL1O15357 1258 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 TRAPPC3O43617 180 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 CNPP09543 421 aaKnown RBP7.88□□□□□ -1.15
NUP43-206ENST00000543637 SP100P23497 879 aaPredicted RBP7.88□□□□□ -1.15
NUP43-206ENST00000543637 MATR3P43243 847 aaKnown RBP eCLIP7.88□□□□□ -1.15
NUP43-206ENST00000543637 TOB1P50616 345 aaPredicted RBP7.88□□□□□ -1.15
NUP43-206ENST00000543637 CLCN4P51793 760 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 AFF1P51825 1210 aaKnown RBP7.88□□□□□ -1.15
NUP43-206ENST00000543637 PEX3P56589 373 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 DSC1Q08554 894 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 ELAVL2Q12926 359 aaKnown RBP7.88□□□□□ -1.15
NUP43-206ENST00000543637 DMP1Q13316 513 aaPredicted RBP7.88□□□□□ -1.15
NUP43-206ENST00000543637 TUSC3Q13454 348 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 AMHR2Q16671 573 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 ATF7IP2Q5U623 682 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 CDCA2Q69YH5 1023 aaPredicted RBP7.88□□□□□ -1.15
NUP43-206ENST00000543637 TMC5Q6UXY8 1006 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 CYP26C1Q6V0L0 522 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 BMP8AQ7Z5Y6 402 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 TMEM173Q86WV6 379 aaPredicted RBP7.88□□□□□ -1.15
NUP43-206ENST00000543637 CEP57Q86XR8 500 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 GPR65Q8IYL9 337 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 C12orf76Q8N812 135 aaPredicted RBP7.88□□□□□ -1.15
NUP43-206ENST00000543637 RASSF8Q8NHQ8 419 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 SLC22A17Q8WUG5 538 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 HDAC7Q8WUI4 952 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 BCL7CQ8WUZ0 217 aaPredicted RBP7.88□□□□□ -1.15
NUP43-206ENST00000543637 STAMQ92783 540 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 CALML4Q96GE6 196 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 PRRX2Q99811 253 aa7.88□□□□□ -1.15
NUP43-206ENST00000543637 CCDC94Q9BW85 323 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms