RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 SART1O43290 800 aaKnown RBP15.01□□□□□ -0.01
MSH2-206ENST00000543555 HSF2BPO75031 334 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 GPC3P51654 580 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 MFAP3P55082 362 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 TCEAL1Q15170 157 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 NOP9Q86U38 636 aaKnown RBP15.01□□□□□ -0.01
MSH2-206ENST00000543555 MREGQ8N565 214 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 EIF1ADQ8N9N8 165 aaKnown RBP15.01□□□□□ -0.01
MSH2-206ENST00000543555 WHAMMQ8TF30 809 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 SHC3Q92529 594 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 POP1Q99575 1024 aaKnown RBP15.01□□□□□ -0.01
MSH2-206ENST00000543555 DDX47Q9H0S4 455 aaKnown RBP15.01□□□□□ -0.01
MSH2-206ENST00000543555 NOCTQ9UK39 431 aaKnown RBP15.01□□□□□ -0.01
MSH2-206ENST00000543555 DIS3Q9Y2L1 958 aaKnown RBP15.01□□□□□ -0.01
MSH2-206ENST00000543555 KIAA1217Q5T5P2 1943 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 DCAF8L1A6NGE4 600 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 TULP1O00294 542 aaPredicted RBP15.01□□□□□ -0.01
MSH2-206ENST00000543555 SORBS3O60504 671 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 CHRNB2P17787 502 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 ERVK-9P63128 1117 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 CYP24A1Q07973 514 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 BRDTQ58F21 947 aaPredicted RBP15.01□□□□□ -0.01
MSH2-206ENST00000543555 MIS18BP1Q6P0N0 1132 aa15.01□□□□□ -0.01
MSH2-206ENST00000543555 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.01□□□□□ -0.01
MSH2-206ENST00000543555 TOPORSQ9NS56 1045 aaPredicted RBP15.01□□□□□ -0.01
MSH2-206ENST00000543555 HNRNPDLO14979 420 aaKnown RBP15□□□□□ -0.01
MSH2-206ENST00000543555 OPA1O60313 960 aa15□□□□□ -0.01
MSH2-206ENST00000543555 RTN2O75298 545 aa15□□□□□ -0.01
MSH2-206ENST00000543555 USP2O75604 605 aaPredicted RBP15□□□□□ -0.01
MSH2-206ENST00000543555 SUPT20HL2P0C7V6 817 aa15□□□□□ -0.01
MSH2-206ENST00000543555 ITGA4P13612 1032 aa15□□□□□ -0.01
MSH2-206ENST00000543555 GTF2H1P32780 548 aa15□□□□□ -0.01
MSH2-206ENST00000543555 SUPT20HL1Q3ZLR7 823 aa15□□□□□ -0.01
MSH2-206ENST00000543555 DCAF12L1Q5VU92 463 aa15□□□□□ -0.01
MSH2-206ENST00000543555 USP37Q86T82 979 aa15□□□□□ -0.01
MSH2-206ENST00000543555 HELQQ8TDG4 1101 aa15□□□□□ -0.01
MSH2-206ENST00000543555 CDCA5Q96FF9 252 aa15□□□□□ -0.01
MSH2-206ENST00000543555 IFT74Q96LB3 600 aa15□□□□□ -0.01
MSH2-206ENST00000543555 PCDHB18PQ96TA0 734 aa15□□□□□ -0.01
MSH2-206ENST00000543555 POLR3FQ9H1D9 316 aaPredicted RBP15□□□□□ -0.01
MSH2-206ENST00000543555 CARD9Q9H257 536 aa15□□□□□ -0.01
MSH2-206ENST00000543555 WDR81Q562E7 1941 aa15□□□□□ -0.01
MSH2-206ENST00000543555 GOLGA6CA6NDK9 693 aa15□□□□□ -0.01
MSH2-206ENST00000543555 BHMG1C9JSJ3 638 aaPredicted RBP15□□□□□ -0.01
MSH2-206ENST00000543555 GOLGA8KD6RF30 607 aa15□□□□□ -0.01
MSH2-206ENST00000543555 CYP26A1O43174 497 aa15□□□□□ -0.01
MSH2-206ENST00000543555 GOLGA6DP0CG33 693 aa15□□□□□ -0.01
MSH2-206ENST00000543555 GARTP22102 1010 aa15□□□□□ -0.01
MSH2-206ENST00000543555 ACTN2P35609 894 aa15□□□□□ -0.01
MSH2-206ENST00000543555 HNRNPH2P55795 449 aaKnown RBP15□□□□□ -0.01
MSH2-206ENST00000543555 GPC5P78333 572 aa15□□□□□ -0.01
MSH2-206ENST00000543555 XKR3Q5GH77 459 aa15□□□□□ -0.01
MSH2-206ENST00000543555 SH3D19Q5HYK7 790 aa15□□□□□ -0.01
MSH2-206ENST00000543555 TAF3Q5VWG9 929 aa15□□□□□ -0.01
MSH2-206ENST00000543555 TAS1R3Q7RTX0 852 aa15□□□□□ -0.01
MSH2-206ENST00000543555 GPD1LQ8N335 351 aa15□□□□□ -0.01
MSH2-206ENST00000543555 FBXL13Q8NEE6 735 aa15□□□□□ -0.01
MSH2-206ENST00000543555 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15□□□□□ -0.01
MSH2-206ENST00000543555 TAS1R2Q8TE23 839 aa15□□□□□ -0.01
MSH2-206ENST00000543555 RUFY1Q96T51 708 aa15□□□□□ -0.01
MSH2-206ENST00000543555 SLITRK6Q9H5Y7 841 aa15□□□□□ -0.01
MSH2-206ENST00000543555 GOLGA6AQ9NYA3 693 aa15□□□□□ -0.01
MSH2-206ENST00000543555 CTTNBP2NLQ9P2B4 639 aa15□□□□□ -0.01
MSH2-206ENST00000543555 ARHGAP28Q9P2N2 729 aa15□□□□□ -0.01
MSH2-206ENST00000543555 GZMAP12544 262 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 GUCY2FP51841 1108 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 SP2Q02086 613 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 ENPEPQ07075 957 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 USP50Q70EL3 339 aaPredicted RBP14.99□□□□□ -0.01
MSH2-206ENST00000543555 SLC47A2Q86VL8 602 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 NT5C1BQ96P26 610 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 ZIM3Q96PE6 472 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 RAB20Q9NX57 234 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 CALCOCO1Q9P1Z2 691 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 BRCA2P51587 3418 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 LOC285556D6RIA3 1793 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 IQCA1LA6NCM1 817 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 H0YCG3 227 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 PEX10O60683 326 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 FGGP02679 453 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 PRPF4BQ13523 1007 aaKnown RBP14.99□□□□□ -0.01
MSH2-206ENST00000543555 CUL1Q13616 776 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 ZSCAN26Q16670 478 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 MTERF2Q49AM1 385 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 C11orf63Q6NUN7 778 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 BICD1Q96G01 975 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 ACP6Q9NPH0 428 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 DOCK5Q9H7D0 1870 aa14.99□□□□□ -0.01
MSH2-206ENST00000543555 PPFIA1Q13136 1202 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 STXBP2Q15833 593 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 SV2AQ7L0J3 742 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 IQCKQ8N0W5 287 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 CHST13Q8NET6 341 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 FAM76AQ8TAV0 307 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 RNPC3Q96LT9 517 aaKnown RBP14.98□□□□□ -0.01
MSH2-206ENST00000543555 ELP3Q9H9T3 547 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 ALG6Q9Y672 507 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 DLATP10515 647 aaKnown RBP14.98□□□□□ -0.01
MSH2-206ENST00000543555 ECHS1P30084 290 aa14.98□□□□□ -0.01
MSH2-206ENST00000543555 ICAM3P32942 547 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms