RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 UBE2SQ16763 222 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 SLC35G1Q2M3R5 365 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 FAM160B1Q5W0V3 765 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 RNF43Q68DV7 783 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 TWF2Q6IBS0 349 aaKnown RBP5.41□□□□□ -1.54
LIMS1-214ENST00000542845 EFCAB12Q6NXP0 572 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 RSPO2Q6UXX9 243 aaPredicted RBP5.41□□□□□ -1.54
LIMS1-214ENST00000542845 CYP26C1Q6V0L0 522 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 MTSS1LQ765P7 747 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 ZNF598Q86UK7 904 aaKnown RBP5.41□□□□□ -1.54
LIMS1-214ENST00000542845 ZNF589Q86UQ0 364 aaPredicted RBP5.41□□□□□ -1.54
LIMS1-214ENST00000542845 LRRC71Q8N4P6 559 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 ITFG1Q8TB96 612 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 PI4K2BQ8TCG2 481 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 URGCPQ8TCY9 931 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 ING5Q8WYH8 240 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 FGF13Q92913 245 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 MTMR8Q96EF0 704 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 MCRS1Q96EZ8 462 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 B3GALT6Q96L58 329 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 RPS6KC1Q96S38 1066 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 MAP7D2Q96T17 732 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 LSM14BQ9BX40 385 aaKnown RBP5.41□□□□□ -1.54
LIMS1-214ENST00000542845 PRKD2Q9BZL6 878 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 PLA2G2FQ9BZM2 168 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 JADE2Q9NQC1 790 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 ZNF302Q9NR11 478 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 DACT1Q9NYF0 836 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 ANKFY1Q9P2R3 1169 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 CDH7Q9ULB5 785 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 SLC27A5Q9Y2P5 690 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 PRG3Q9Y2Y8 225 aaPredicted RBP5.41□□□□□ -1.54
LIMS1-214ENST00000542845 UBIAD1Q9Y5Z9 338 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 FRMPD4Q14CM0 1322 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 TTC41PQ6P2S7 1318 aa5.41□□□□□ -1.54
LIMS1-214ENST00000542845 MYH9P35579 1960 aaKnown RBP5.4□□□□□ -1.54
LIMS1-214ENST00000542845 SETXQ7Z333 2677 aaKnown RBP5.4□□□□□ -1.54
LIMS1-214ENST00000542845 SPDYE3A6NKU9 549 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 MEIS2O14770 477 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 CCL16O15467 120 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 MAFGO15525 162 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 TGM5O43548 720 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 CYTH3O43739 400 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 B4GALT3O60512 393 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 OFD1O75665 1012 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 POMCP01189 267 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 SOD2P04179 222 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 FBXO45P0C2W1 286 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 ZNF806P0C7X5 589 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 PCP11498 1178 aaKnown RBP5.4□□□□□ -1.54
LIMS1-214ENST00000542845 EIF4BP23588 611 aaKnown RBP5.4□□□□□ -1.54
LIMS1-214ENST00000542845 TMOD1P28289 359 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 HOXC13P31276 330 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 PHKA2P46019 1235 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 PXNP49023 591 aaPredicted RBP5.4□□□□□ -1.54
LIMS1-214ENST00000542845 GLUD2P49448 558 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 LIMK1P53667 647 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 GRM2Q14416 872 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 COL28A1Q2UY09 1125 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 SH3PXD2AQ5TCZ1 1133 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 FAM43BQ6ZT52 329 aaPredicted RBP5.4□□□□□ -1.54
LIMS1-214ENST00000542845 PDZD3Q86UT5 571 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 LAPTM4BQ86VI4 370 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 RILPL2Q969X0 211 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 ZFRQ96KR1 1074 aaKnown RBP5.4□□□□□ -1.54
LIMS1-214ENST00000542845 PLEKHA4Q9H4M7 779 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 RIOX1Q9H6W3 641 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 KCNH7Q9NS40 1196 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 FKBPLQ9UIM3 349 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 PCDHA6Q9UN73 950 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 PIN4Q9Y237 131 aaKnown RBP5.4□□□□□ -1.54
LIMS1-214ENST00000542845 SSX2IPQ9Y2D8 614 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 PCDHA8Q9Y5H6 950 aa5.4□□□□□ -1.54
LIMS1-214ENST00000542845 ZFP37Q9Y6Q3 630 aaPredicted RBP5.4□□□□□ -1.54
LIMS1-214ENST00000542845 FRYQ5TBA9 3013 aa5.4□□□□□ -1.55
LIMS1-214ENST00000542845 TICRRQ7Z2Z1 1910 aa5.4□□□□□ -1.55
LIMS1-214ENST00000542845 COL1A2P08123 1366 aa5.4□□□□□ -1.55
LIMS1-214ENST00000542845 ANKRD11Q6UB99 2663 aaPredicted RBP5.4□□□□□ -1.55
LIMS1-214ENST00000542845 hCG_1642624A0A1W2PR95 340 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 C4orf47A7E2U8 309 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 ZBTB42B2RXF5 422 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 F8W810 466 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 PIK3CDO00329 1044 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 MAN2B1O00754 1011 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 ACTN4O43707 911 aaKnown RBP5.39□□□□□ -1.55
LIMS1-214ENST00000542845 HYAL3O43820 417 aaPredicted RBP5.39□□□□□ -1.55
LIMS1-214ENST00000542845 C22orf31O95567 290 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 CCDC192P0DO97 292 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 TDGF1P13385 188 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 DARSP14868 501 aaKnown RBP5.39□□□□□ -1.55
LIMS1-214ENST00000542845 ATP4AP20648 1035 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 CNR2P34972 360 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 ZNF76P36508 570 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 SLC26A2P50443 739 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 AFF1P51825 1210 aaKnown RBP5.39□□□□□ -1.55
LIMS1-214ENST00000542845 UAP1L1Q3KQV9 507 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 PPM1LQ5SGD2 360 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 TCEAL6Q6IPX3 200 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 MIS18BP1Q6P0N0 1132 aa5.39□□□□□ -1.55
LIMS1-214ENST00000542845 ABHD15Q6UXT9 468 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms