RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 KCNH6Q9H252 994 aa22.04■■□□□ 1.12
DDX11-220ENST00000542244 MRPL17Q9NRX2 175 aaKnown RBP22.04■■□□□ 1.12
DDX11-220ENST00000542244 FAM86C1Q9NVL1 165 aa22.04■■□□□ 1.12
DDX11-220ENST00000542244 DENND4AQ7Z401 1863 aa22.04■■□□□ 1.12
DDX11-220ENST00000542244 N4BP1O75113 896 aaKnown RBP22.03■■□□□ 1.12
DDX11-220ENST00000542244 RFPL2O75678 378 aa22.03■■□□□ 1.12
DDX11-220ENST00000542244 RPL17P18621 184 aaKnown RBP22.03■■□□□ 1.12
DDX11-220ENST00000542244 AVPR2P30518 371 aa22.03■■□□□ 1.12
DDX11-220ENST00000542244 SUGP1Q8IWZ8 645 aaKnown RBP22.03■■□□□ 1.12
DDX11-220ENST00000542244 TDRD5Q8NAT2 981 aaKnown RBP22.03■■□□□ 1.12
DDX11-220ENST00000542244 CCDC43Q96MW1 224 aaKnown RBP22.03■■□□□ 1.12
DDX11-220ENST00000542244 KIFC3Q9BVG8 833 aa22.03■■□□□ 1.12
DDX11-220ENST00000542244 FZD8Q9H461 694 aa22.03■■□□□ 1.12
DDX11-220ENST00000542244 SFXN1Q9H9B4 322 aa22.03■■□□□ 1.12
DDX11-220ENST00000542244 TUFT1Q9NNX1 390 aa22.03■■□□□ 1.12
DDX11-220ENST00000542244 UBN1Q9NPG3 1134 aa22.03■■□□□ 1.12
DDX11-220ENST00000542244 MAN1C1Q9NR34 630 aa22.03■■□□□ 1.12
DDX11-220ENST00000542244 PARP2Q9UGN5 583 aa22.03■■□□□ 1.12
DDX11-220ENST00000542244 SORCS3Q9UPU3 1222 aa22.03■■□□□ 1.12
DDX11-220ENST00000542244 GIT1Q9Y2X7 761 aa22.03■■□□□ 1.12
DDX11-220ENST00000542244 C2orf16Q68DN1 1984 aa22.03■■□□□ 1.12
DDX11-220ENST00000542244 OR52Z1P0C646 297 aa22.02■■□□□ 1.12
DDX11-220ENST00000542244 XRCC6P12956 609 aaKnown RBP eCLIP22.02■■□□□ 1.12
DDX11-220ENST00000542244 EEF1DP3Q658K8 133 aa22.02■■□□□ 1.12
DDX11-220ENST00000542244 CDCA2Q69YH5 1023 aaPredicted RBP22.02■■□□□ 1.12
DDX11-220ENST00000542244 SLC27A1Q6PCB7 646 aa22.02■■□□□ 1.12
DDX11-220ENST00000542244 GLYCTKQ8IVS8 523 aa22.02■■□□□ 1.12
DDX11-220ENST00000542244 ZDHHC14Q8IZN3 488 aa22.02■■□□□ 1.12
DDX11-220ENST00000542244 POLR3CQ9BUI4 534 aaPredicted RBP22.02■■□□□ 1.12
DDX11-220ENST00000542244 PDZD7Q9H5P4 517 aa22.02■■□□□ 1.12
DDX11-220ENST00000542244 PIEZO1Q92508 2521 aa22.01■■□□□ 1.11
DDX11-220ENST00000542244 URODP06132 367 aa22.01■■□□□ 1.11
DDX11-220ENST00000542244 GLUD2P49448 558 aa22.01■■□□□ 1.11
DDX11-220ENST00000542244 PCBP1Q15365 356 aaKnown RBP eCLIP22.01■■□□□ 1.11
DDX11-220ENST00000542244 TTC38Q5R3I4 469 aa22.01■■□□□ 1.11
DDX11-220ENST00000542244 PADI6Q6TGC4 694 aa22.01■■□□□ 1.11
DDX11-220ENST00000542244 PPP4R3CPQ6ZMV5 832 aa22.01■■□□□ 1.11
DDX11-220ENST00000542244 PPFIBP1Q86W92 1011 aa22.01■■□□□ 1.11
DDX11-220ENST00000542244 FBXO18Q8NFZ0 1043 aa22.01■■□□□ 1.11
DDX11-220ENST00000542244 HASPINQ8TF76 798 aa22.01■■□□□ 1.11
DDX11-220ENST00000542244 TRIM6Q9C030 488 aaPredicted RBP22.01■■□□□ 1.11
DDX11-220ENST00000542244 CCDC113Q9H0I3 377 aa22.01■■□□□ 1.11
DDX11-220ENST00000542244 RXFP1Q9HBX9 757 aa22.01■■□□□ 1.11
DDX11-220ENST00000542244 CHST7Q9NS84 486 aa22.01■■□□□ 1.11
DDX11-220ENST00000542244 CARNS1A5YM72 827 aa22■■□□□ 1.11
DDX11-220ENST00000542244 PTGESO14684 152 aa22■■□□□ 1.11
DDX11-220ENST00000542244 LIG1P18858 919 aa22■■□□□ 1.11
DDX11-220ENST00000542244 TOB1P50616 345 aaPredicted RBP22■■□□□ 1.11
DDX11-220ENST00000542244 DSG1Q02413 1049 aa22■■□□□ 1.11
DDX11-220ENST00000542244 MTMR3Q13615 1198 aa22■■□□□ 1.11
DDX11-220ENST00000542244 ERICH6BQ5W0A0 696 aa22■■□□□ 1.11
DDX11-220ENST00000542244 FUT10Q6P4F1 479 aa22■■□□□ 1.11
DDX11-220ENST00000542244 PALB2Q86YC2 1186 aa22■■□□□ 1.11
DDX11-220ENST00000542244 NOSTRINQ8IVI9 506 aa22■■□□□ 1.11
DDX11-220ENST00000542244 NACC1Q96RE7 527 aa22■■□□□ 1.11
DDX11-220ENST00000542244 SNTG2Q9NY99 539 aa22■■□□□ 1.11
DDX11-220ENST00000542244 TDRD15B5MCY1 1934 aaKnown RBP22■■□□□ 1.11
DDX11-220ENST00000542244 CYP11B2P19099 503 aa21.99■■□□□ 1.11
DDX11-220ENST00000542244 RPA1P27694 616 aa21.99■■□□□ 1.11
DDX11-220ENST00000542244 NCBP1Q09161 790 aaKnown RBP21.99■■□□□ 1.11
DDX11-220ENST00000542244 SAFBQ15424 915 aaKnown RBP eCLIP21.99■■□□□ 1.11
DDX11-220ENST00000542244 NAB2Q15742 525 aa21.99■■□□□ 1.11
DDX11-220ENST00000542244 IL17AQ16552 155 aa21.99■■□□□ 1.11
DDX11-220ENST00000542244 PRSS55Q6UWB4 352 aaPredicted RBP21.99■■□□□ 1.11
DDX11-220ENST00000542244 TMEM105Q8N8V8 129 aa21.99■■□□□ 1.11
DDX11-220ENST00000542244 ST13P5Q8NFI4 369 aaPredicted RBP21.99■■□□□ 1.11
DDX11-220ENST00000542244 RSAD2Q8WXG1 361 aa21.99■■□□□ 1.11
DDX11-220ENST00000542244 ZNF707Q96C28 371 aaPredicted RBP21.99■■□□□ 1.11
DDX11-220ENST00000542244 FOXP1Q9H334 677 aaPredicted RBP21.99■■□□□ 1.11
DDX11-220ENST00000542244 CCDC195A0A1B0GUA6 201 aa21.98■■□□□ 1.11
DDX11-220ENST00000542244 CASTOR2A6NHX0 329 aa21.98■■□□□ 1.11
DDX11-220ENST00000542244 SPDYE4A6NLX3 237 aa21.98■■□□□ 1.11
DDX11-220ENST00000542244 PP2D1A8MPX8 630 aa21.98■■□□□ 1.11
DDX11-220ENST00000542244 FAM187BQ17R55 369 aa21.98■■□□□ 1.11
DDX11-220ENST00000542244 C8orf34Q49A92 452 aa21.98■■□□□ 1.11
DDX11-220ENST00000542244 RTP2Q5QGT7 225 aa21.98■■□□□ 1.11
DDX11-220ENST00000542244 MCPH1Q8NEM0 835 aa21.98■■□□□ 1.11
DDX11-220ENST00000542244 LLPHQ9BRT6 129 aaKnown RBP21.98■■□□□ 1.11
DDX11-220ENST00000542244 COLEC11Q9BWP8 271 aa21.98■■□□□ 1.11
DDX11-220ENST00000542244 PRMT7Q9NVM4 692 aaPredicted RBP21.98■■□□□ 1.11
DDX11-220ENST00000542244 USTQ9Y2C2 406 aa21.98■■□□□ 1.11
DDX11-220ENST00000542244 PCDHB6Q9Y5E3 794 aa21.98■■□□□ 1.11
DDX11-220ENST00000542244 ARHGEF35A5YM69 484 aa21.97■■□□□ 1.11
DDX11-220ENST00000542244 TGM5O43548 720 aa21.97■■□□□ 1.11
DDX11-220ENST00000542244 NARSO43776 548 aaKnown RBP21.97■■□□□ 1.11
DDX11-220ENST00000542244 PRKCBP05771 671 aa21.97■■□□□ 1.11
DDX11-220ENST00000542244 GRIK3Q13003 919 aa21.97■■□□□ 1.11
DDX11-220ENST00000542244 NT5DC1Q5TFE4 455 aa21.97■■□□□ 1.11
DDX11-220ENST00000542244 CCDC149Q6ZUS6 474 aa21.97■■□□□ 1.11
DDX11-220ENST00000542244 UBALD2Q8IYN6 164 aa21.97■■□□□ 1.11
DDX11-220ENST00000542244 RIN2Q8WYP3 895 aaPredicted RBP21.97■■□□□ 1.11
DDX11-220ENST00000542244 ADAM28Q9UKQ2 775 aa21.97■■□□□ 1.11
DDX11-220ENST00000542244 ADAM12O43184 909 aa21.96■■□□□ 1.11
DDX11-220ENST00000542244 RECQL4O94761 1208 aa21.96■■□□□ 1.11
DDX11-220ENST00000542244 KIF4AO95239 1232 aa21.96■■□□□ 1.11
DDX11-220ENST00000542244 GLUD1P00367 558 aa21.96■■□□□ 1.11
DDX11-220ENST00000542244 ADH1AP07327 375 aa21.96■■□□□ 1.11
DDX11-220ENST00000542244 CDC25AP30304 524 aa21.96■■□□□ 1.11
DDX11-220ENST00000542244 CCT6AP40227 531 aaKnown RBP21.96■■□□□ 1.11
DDX11-220ENST00000542244 PTPN5P54829 565 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms