RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 VWA3AA6NCI4 1184 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 FAM86C2PA6NEL3 165 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 GALR2O43603 387 aaPredicted RBP8.5□□□□□ -1.05
NECAP1-205ENST00000541948 ERLIN2O94905 339 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 WEE2P0C1S8 567 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 ITGA4P13612 1032 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 EPCAMP16422 314 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 PPM1AP35813 382 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 NDUFV1P49821 464 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 NUBP1P53384 320 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 RESTQ13127 1097 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 SMAD4Q13485 552 aaKnown RBP8.5□□□□□ -1.05
NECAP1-205ENST00000541948 GNL2Q13823 731 aaKnown RBP8.5□□□□□ -1.05
NECAP1-205ENST00000541948 TFDP1Q14186 410 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 PDCD11Q14690 1871 aaKnown RBP8.5□□□□□ -1.05
NECAP1-205ENST00000541948 PTPAQ15257 358 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 PTPN14Q15678 1187 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 FAM187BQ17R55 369 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 TMEM119Q4V9L6 283 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 RILPL1Q5EBL4 403 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 ARSHQ5FYA8 562 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 LARP1BQ659C4 914 aaKnown RBP8.5□□□□□ -1.05
NECAP1-205ENST00000541948 ANKRD54Q6NXT1 300 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 LLGL2Q6P1M3 1020 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 NOTUMQ6P988 496 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 CD300LGQ6UXG3 332 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 DDX53Q86TM3 631 aaKnown RBP8.5□□□□□ -1.05
NECAP1-205ENST00000541948 VPS52Q8N1B4 723 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 C12orf76Q8N812 135 aaPredicted RBP8.5□□□□□ -1.05
NECAP1-205ENST00000541948 CEP120Q8N960 986 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 MCPH1Q8NEM0 835 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 MRPL9Q9BYD2 267 aaKnown RBP8.5□□□□□ -1.05
NECAP1-205ENST00000541948 BLOC1S4Q9NUP1 217 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 SNTG2Q9NY99 539 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 PUF60Q9UHX1 559 aaKnown RBP8.5□□□□□ -1.05
NECAP1-205ENST00000541948 SMC3Q9UQE7 1217 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 USP15Q9Y4E8 981 aaPredicted RBP8.5□□□□□ -1.05
NECAP1-205ENST00000541948 HCFC2Q9Y5Z7 792 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 CLIC4Q9Y696 253 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 MUC6Q6W4X9 2439 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 MYH11P35749 1972 aa8.5□□□□□ -1.05
NECAP1-205ENST00000541948 ARHGEF35A5YM69 484 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 HIP1RO75146 1068 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 SSBP05455 408 aaKnown RBP eCLIP8.49□□□□□ -1.05
NECAP1-205ENST00000541948 CNPP09543 421 aaKnown RBP8.49□□□□□ -1.05
NECAP1-205ENST00000541948 CTSAP10619 480 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 SKIP12755 728 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 MUTP22033 750 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 AXLP30530 894 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 NAMPTP43490 491 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 NPTX2P47972 431 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 SLC12A3P55017 1021 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 RAD51AP2Q09MP3 1159 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 HAUS3Q68CZ6 603 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 SLC27A1Q6PCB7 646 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 DTHD1Q6ZMT9 781 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 TMC7Q7Z402 723 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 BMP8AQ7Z5Y6 402 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 PGBD4Q96DM1 585 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 GPR62Q9BZJ7 368 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 HAPLN2Q9GZV7 340 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 PTPRHQ9HD43 1115 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 ENTPD7Q9NQZ7 604 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 ARHGAP28Q9P2N2 729 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 PRG3Q9Y2Y8 225 aaPredicted RBP8.49□□□□□ -1.05
NECAP1-205ENST00000541948 IRAK3Q9Y616 596 aa8.49□□□□□ -1.05
NECAP1-205ENST00000541948 LOC730098B7Z3J9 87 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 LAD1O00515 517 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 ACKR2O00590 384 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 RECQL4O94761 1208 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 CXCL14O95715 111 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 PRKCBP05771 671 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 HOXB8P17481 243 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-205ENST00000541948 LIG1P18858 919 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 SYT1P21579 422 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 ALDH7A1P49419 539 aaKnown RBP8.48□□□□□ -1.05
NECAP1-205ENST00000541948 MCM2P49736 904 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 PEX3P56589 373 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 KRT17Q04695 432 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 SOX4Q06945 474 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-205ENST00000541948 GIT2Q14161 759 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 SMC1AQ14683 1233 aaKnown RBP8.48□□□□□ -1.05
NECAP1-205ENST00000541948 PCBP1Q15365 356 aaKnown RBP eCLIP8.48□□□□□ -1.05
NECAP1-205ENST00000541948 SF3A1Q15459 793 aaKnown RBP8.48□□□□□ -1.05
NECAP1-205ENST00000541948 HERC4Q5GLZ8 1057 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-205ENST00000541948 SPECC1Q5M775 1068 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 KIAA0319Q5VV43 1072 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 SYT2Q8N9I0 419 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-205ENST00000541948 C3orf58Q8NDZ4 430 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 ERMNQ8TAM6 284 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 CCDC51Q96ER9 411 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 TMEM169Q96HH4 297 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 ZBTB45Q96K62 511 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-205ENST00000541948 PRIMPOLQ96LW4 560 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 CCDC43Q96MW1 224 aaKnown RBP8.48□□□□□ -1.05
NECAP1-205ENST00000541948 KLHL5Q96PQ7 755 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 FIZ1Q96SL8 496 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 TMEM175Q9BSA9 504 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 IKZF4Q9H2S9 585 aa8.48□□□□□ -1.05
NECAP1-205ENST00000541948 NGRNQ9NPE2 291 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms