RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 EVPLQ92817 2033 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 COL4A3Q01955 1670 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 SMG1Q96Q15 3661 aaKnown RBP10.67□□□□□ -0.7
YBX3-211ENST00000541351 SHISA7A6NL88 538 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 ZBTB42B2RXF5 422 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 ZNF197O14709 1029 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 ZNF263O14978 683 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 CCL16O15467 120 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 MAP3K13O43283 966 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 DDHD2O94830 711 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 CCNE1P24864 410 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 CREB5Q02930 508 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 LMAN2Q12907 356 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 SART3Q15020 963 aaKnown RBP10.67□□□□□ -0.7
YBX3-211ENST00000541351 IMMTQ16891 758 aaKnown RBP10.67□□□□□ -0.7
YBX3-211ENST00000541351 LONRF3Q496Y0 759 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 CEP55Q53EZ4 464 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 AGMOQ6ZNB7 445 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 CATSPER4Q7RTX7 472 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 ZNF410Q86VK4 478 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 GLYCTKQ8IVS8 523 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 CCDC60Q8IWA6 550 aaPredicted RBP10.67□□□□□ -0.7
YBX3-211ENST00000541351 SMAP1Q8IYB5 467 aaPredicted RBP10.67□□□□□ -0.7
YBX3-211ENST00000541351 HACE1Q8IYU2 909 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 LSM14AQ8ND56 463 aaKnown RBP10.67□□□□□ -0.7
YBX3-211ENST00000541351 PI4K2BQ8TCG2 481 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 E2F7Q96AV8 911 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 LRIG1Q96JA1 1093 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 KLK13Q9UKR3 277 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 PCDHB2Q9Y5E7 798 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 PCDHB15Q9Y5E8 787 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 SPAG17Q6Q759 2223 aa10.67□□□□□ -0.7
YBX3-211ENST00000541351 SDK1Q7Z5N4 2213 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 LNP1A1A4G5 178 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 POMCP01189 267 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 PSAPP07602 524 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 GDI1P31150 447 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 NTHL1P78549 312 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 SIM1P81133 766 aaPredicted RBP10.66□□□□□ -0.7
YBX3-211ENST00000541351 TRDNQ13061 729 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 FUT10Q6P4F1 479 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 TAS1R1Q7RTX1 841 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 YAF2Q8IY57 180 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 LRRC71Q8N4P6 559 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 CAMKK1Q8N5S9 505 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 DEFB124Q8NES8 71 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 PIK3R5Q8WYR1 880 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 MCRS1Q96EZ8 462 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 BBC3Q96PG8 261 aaPredicted RBP10.66□□□□□ -0.7
YBX3-211ENST00000541351 LZTS2Q9BRK4 669 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 AGO4Q9HCK5 861 aaKnown RBP10.66□□□□□ -0.7
YBX3-211ENST00000541351 AVENQ9NQS1 362 aaPredicted RBP10.66□□□□□ -0.7
YBX3-211ENST00000541351 MARCH5Q9NX47 278 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 DACH1Q9UI36 760 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 PCDHA6Q9UN73 950 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 SLC8A2Q9UPR5 921 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 PCDHA8Q9Y5H6 950 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 MAFBQ9Y5Q3 323 aaPredicted RBP10.66□□□□□ -0.7
YBX3-211ENST00000541351 ITPR1Q14643 2758 aa10.66□□□□□ -0.7
YBX3-211ENST00000541351 SF3B1O75533 1304 aaKnown RBP eCLIP10.65□□□□□ -0.7
YBX3-211ENST00000541351 BCLAF3A2AJT9 711 aaKnown RBP10.65□□□□□ -0.7
YBX3-211ENST00000541351 J3QKU1 62 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 CAPN9O14815 690 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 CYTH3O43739 400 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 FOSP01100 380 aaPredicted RBP10.65□□□□□ -0.7
YBX3-211ENST00000541351 PLA2G2AP14555 144 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 MX1P20591 662 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 FGFR4P22455 802 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 SMARCA1P28370 1054 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 ZNF76P36508 570 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 KPNA1P52294 538 aaPredicted RBP10.65□□□□□ -0.7
YBX3-211ENST00000541351 SCAPQ12770 1279 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 UAP1L1Q3KQV9 507 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 PLK5Q496M5 336 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 TANGO2Q6ICL3 276 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 TCEAL6Q6IPX3 200 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 CATIPQ7Z7H3 387 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 MAP4K3Q8IVH8 894 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 COLGALT2Q8IYK4 626 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 LINC01465Q8N7H1 131 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 SLC7A14Q8TBB6 771 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 HNRNPLLQ8WVV9 542 aaKnown RBP10.65□□□□□ -0.7
YBX3-211ENST00000541351 ING5Q8WYH8 240 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 TCEAL3Q969E4 200 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 SPZ1Q9BXG8 430 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 SMOC1Q9H4F8 434 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 TBC1D22BQ9NU19 505 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 ADAM28Q9UKQ2 775 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 RAI2Q9Y5P3 530 aa10.65□□□□□ -0.7
YBX3-211ENST00000541351 DDX39AO00148 427 aaKnown RBP10.64□□□□□ -0.71
YBX3-211ENST00000541351 TADA2AO75478 443 aa10.64□□□□□ -0.71
YBX3-211ENST00000541351 MICAL2O94851 1124 aa10.64□□□□□ -0.71
YBX3-211ENST00000541351 PTPN2P17706 415 aa10.64□□□□□ -0.71
YBX3-211ENST00000541351 GNAQP50148 359 aa10.64□□□□□ -0.71
YBX3-211ENST00000541351 ELAVL2Q12926 359 aaKnown RBP10.64□□□□□ -0.71
YBX3-211ENST00000541351 GAS6Q14393 721 aa10.64□□□□□ -0.71
YBX3-211ENST00000541351 GRM2Q14416 872 aa10.64□□□□□ -0.71
YBX3-211ENST00000541351 ZNF746Q6NUN9 644 aaPredicted RBP10.64□□□□□ -0.71
YBX3-211ENST00000541351 NIPA1Q7RTP0 329 aa10.64□□□□□ -0.71
YBX3-211ENST00000541351 TRMT1LQ7Z2T5 733 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms