RNA–Protein interactions for RNA: ENST00000541030.5

STRC-213, Transcript of stereocilin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene STRC, Length 5,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-213ENST00000541030 KRT17Q04695 432 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 ACTN3Q08043 901 aaPredicted RBP13.18□□□□□ -0.3
STRC-213ENST00000541030 AGPAT1Q99943 283 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 GJB4Q9NTQ9 266 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 PITPNM2Q9BZ72 1349 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 ORC4O43929 436 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 MRPS15P82914 257 aaKnown RBP13.18□□□□□ -0.3
STRC-213ENST00000541030 PTK2BQ14289 1009 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 SHC4Q6S5L8 630 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 PBXIP1Q96AQ6 731 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 UVRAGQ9P2Y5 699 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 INPP5FQ9Y2H2 1132 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 MARK3P27448 753 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 PGM1P36871 562 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 RNF219Q5W0B1 726 aaPredicted RBP13.18□□□□□ -0.3
STRC-213ENST00000541030 CIAPIN1Q6FI81 312 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 CCDC90BQ9GZT6 254 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 DCP1AQ9NPI6 582 aaPredicted RBP13.18□□□□□ -0.3
STRC-213ENST00000541030 ZNF302Q9NR11 478 aa13.18□□□□□ -0.3
STRC-213ENST00000541030 A0A1B0GTH6 734 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 FAM95CA0A1B0GW59 222 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 E5RI56 91 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 POU5F1BQ06416 359 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 INPP5AQ14642 412 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 AGBL2Q5U5Z8 902 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 GLYCTKQ8IVS8 523 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 KIAA2013Q8IYS2 634 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 RCOR2Q8IZ40 523 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 OPTNQ96CV9 577 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 SGSM3Q96HU1 749 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 TRIM54Q9BYV2 358 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 ABCF3Q9NUQ8 709 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 PAIP2BQ9ULR5 123 aaKnown RBP13.17□□□□□ -0.3
STRC-213ENST00000541030 C16orf96A6NNT2 1141 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 ITIH2P19823 946 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 IRX1P78414 480 aaPredicted RBP13.17□□□□□ -0.3
STRC-213ENST00000541030 MMTAG2Q9BU76 263 aaKnown RBP13.17□□□□□ -0.3
STRC-213ENST00000541030 MLXIPLQ9NP71 852 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 STMN3Q9NZ72 180 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 MPP6Q9NZW5 540 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 SLC4A7Q9Y6M7 1214 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 KRT16P08779 473 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 HADHAP40939 763 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 SKOR1P84550 965 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 GPR162Q16538 588 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 KHDRBS2Q5VWX1 349 aaKnown RBP13.17□□□□□ -0.3
STRC-213ENST00000541030 DDX42Q86XP3 938 aaKnown RBP eCLIP13.17□□□□□ -0.3
STRC-213ENST00000541030 TRABDQ9H4I3 376 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 SMAPO00193 183 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 APOL1O14791 398 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 CDH16O75309 829 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 CDC27P30260 824 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 ARSEP51690 589 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 VSNL1P62760 191 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 PRAMEP78395 509 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 LRRC14Q15048 493 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 SLC18A3Q16572 532 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 APLFQ8IW19 511 aaPredicted RBP13.17□□□□□ -0.3
STRC-213ENST00000541030 FAM167BQ9BTA0 163 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 CCSER1Q9C0I3 900 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 GPBP1L1Q9HC44 474 aaPredicted RBP13.17□□□□□ -0.3
STRC-213ENST00000541030 TUFT1Q9NNX1 390 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 IRAK4Q9NWZ3 460 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 PCSK1NQ9UHG2 260 aa13.17□□□□□ -0.3
STRC-213ENST00000541030 PSMD3O43242 534 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 CDH2P19022 906 aaPredicted RBP13.16□□□□□ -0.3
STRC-213ENST00000541030 HLA-DPA1P20036 260 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 TTC23LQ6PF05 361 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 MIGA2Q7L4E1 593 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 RASGRP2Q7LDG7 609 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 MASTLQ96GX5 879 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.16□□□□□ -0.3
STRC-213ENST00000541030 DDX28Q9NUL7 540 aaKnown RBP13.16□□□□□ -0.3
STRC-213ENST00000541030 EHD2Q9NZN4 543 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 USP17L15C9J2P7 530 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 USP17L13C9JLJ4 530 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 USP17L11C9JVI0 530 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 USP17L18D6R9N7 530 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 USP17L22D6RA61 530 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 USP17L17D6RBQ6 530 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 USP17L19D6RCP7 530 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 USP17L20D6RJB6 530 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 EYA4O95677 639 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 CRKP46108 304 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 USP17L24Q0WX57 530 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 USP17L6PQ6QN14 398 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 NR1H4Q96RI1 486 aaPredicted RBP13.16□□□□□ -0.3
STRC-213ENST00000541030 SLC13A1Q9BZW2 595 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 ZCCHC17Q9NP64 241 aaKnown RBP13.16□□□□□ -0.3
STRC-213ENST00000541030 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.16□□□□□ -0.3
STRC-213ENST00000541030 TMEM94Q12767 1356 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 PNPLA7Q6ZV29 1317 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 GOLGA8TH3BQL2 631 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 PHF2O75151 1096 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 SERPINB9P50453 376 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 CUL3Q13618 768 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 EPHA7Q15375 998 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 SRLQ86TD4 932 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 PIGBQ92521 554 aa13.16□□□□□ -0.3
STRC-213ENST00000541030 EPAS1Q99814 870 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms