RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 MIIPQ5JXC2 388 aa8.19□□□□□ -1.1
YBX3-210ENST00000540975 METTL24Q5JXM2 366 aa8.19□□□□□ -1.1
YBX3-210ENST00000540975 MBNL2Q5VZF2 373 aaKnown RBP8.19□□□□□ -1.1
YBX3-210ENST00000540975 HTR3DQ70Z44 454 aa8.19□□□□□ -1.1
YBX3-210ENST00000540975 PLEKHG4BQ96PX9 1271 aa8.19□□□□□ -1.1
YBX3-210ENST00000540975 VPS11Q9H270 941 aa8.19□□□□□ -1.1
YBX3-210ENST00000540975 DMRT3Q9NQL9 472 aa8.19□□□□□ -1.1
YBX3-210ENST00000540975 ZBTB21Q9ULJ3 1066 aa8.19□□□□□ -1.1
YBX3-210ENST00000540975 HDAC5Q9UQL6 1122 aa8.19□□□□□ -1.1
YBX3-210ENST00000540975 LOC105371045A0A1W2PR82 267 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 ANKRD62A6NC57 917 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 GOLGA6L6A8MZA4 724 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 C1SP09871 688 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 CLUL1Q15846 466 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 NAIF1Q69YI7 327 aaPredicted RBP8.18□□□□□ -1.1
YBX3-210ENST00000540975 PDZD4Q76G19 769 aaPredicted RBP8.18□□□□□ -1.1
YBX3-210ENST00000540975 DOK3Q7L591 496 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 GPRIN1Q7Z2K8 1008 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 XYLT1Q86Y38 959 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 OR7D4Q8NG98 312 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 PGBD4Q96DM1 585 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 ADI1Q9BV57 179 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 BRINP2Q9C0B6 783 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 BCO1Q9HAY6 547 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 MKS1Q9NXB0 559 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 CEP72Q9P209 647 aa8.18□□□□□ -1.1
YBX3-210ENST00000540975 GABRDO14764 452 aa8.17□□□□□ -1.1
YBX3-210ENST00000540975 ADCY6O43306 1168 aa8.17□□□□□ -1.1
YBX3-210ENST00000540975 RBP3P10745 1247 aa8.17□□□□□ -1.1
YBX3-210ENST00000540975 HSP90B1P14625 803 aaKnown RBP8.17□□□□□ -1.1
YBX3-210ENST00000540975 DGCR2P98153 550 aa8.17□□□□□ -1.1
YBX3-210ENST00000540975 NOMO1Q15155 1222 aa8.17□□□□□ -1.1
YBX3-210ENST00000540975 DCAF17Q5H9S7 520 aaPredicted RBP8.17□□□□□ -1.1
YBX3-210ENST00000540975 PRAMEF14Q5SWL7 426 aa8.17□□□□□ -1.1
YBX3-210ENST00000540975 ANKS6Q68DC2 871 aa8.17□□□□□ -1.1
YBX3-210ENST00000540975 CRIP3Q6Q6R5 217 aa8.17□□□□□ -1.1
YBX3-210ENST00000540975 REPS2Q8NFH8 660 aa8.17□□□□□ -1.1
YBX3-210ENST00000540975 OR52N2Q8NGI0 321 aa8.17□□□□□ -1.1
YBX3-210ENST00000540975 HOXB13Q92826 284 aaPredicted RBP8.17□□□□□ -1.1
YBX3-210ENST00000540975 CEP95Q96GE4 821 aa8.17□□□□□ -1.1
YBX3-210ENST00000540975 GPATCH3Q96I76 525 aa8.17□□□□□ -1.1
YBX3-210ENST00000540975 PARPBPQ9NWS1 579 aa8.17□□□□□ -1.1
YBX3-210ENST00000540975 PCDHGA12O60330 932 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 MT-CO1P00395 513 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 MYBL2P10244 700 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 ECHS1P30084 290 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 PTPN7P35236 360 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 ZXDAP98168 799 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 FAM47AQ5JRC9 791 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 GJC2Q5T442 439 aaPredicted RBP8.16□□□□□ -1.1
YBX3-210ENST00000540975 PPM1NQ8N819 430 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 SSH1Q8WYL5 1049 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 JADE3Q92613 823 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 MTMR8Q96EF0 704 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 FUBP3Q96I24 572 aaKnown RBP eCLIP8.16□□□□□ -1.1
YBX3-210ENST00000540975 CPEB1Q9BZB8 566 aaKnown RBP8.16□□□□□ -1.1
YBX3-210ENST00000540975 SHROOM4Q9ULL8 1493 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 PCDHGA9Q9Y5G4 932 aaKnown RBP8.16□□□□□ -1.1
YBX3-210ENST00000540975 PCDHGA8Q9Y5G5 932 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 PCDHGA7Q9Y5G6 932 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 PCDHGA6Q9Y5G7 932 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 PCDHGA3Q9Y5H0 932 aa8.16□□□□□ -1.1
YBX3-210ENST00000540975 KLHL33A6NCF5 533 aa8.15□□□□□ -1.1
YBX3-210ENST00000540975 TBKBP1A7MCY6 615 aa8.15□□□□□ -1.1
YBX3-210ENST00000540975 SREBF1P36956 1147 aa8.15□□□□□ -1.1
YBX3-210ENST00000540975 VPS72Q15906 364 aa8.15□□□□□ -1.1
YBX3-210ENST00000540975 CSRP2Q16527 193 aa8.15□□□□□ -1.1
YBX3-210ENST00000540975 MFSD14BQ5SR56 506 aa8.15□□□□□ -1.1
YBX3-210ENST00000540975 CACTINQ8WUQ7 758 aaKnown RBP8.15□□□□□ -1.1
YBX3-210ENST00000540975 CSRNP2Q9H175 543 aa8.15□□□□□ -1.1
YBX3-210ENST00000540975 DNM3Q9UQ16 869 aa8.15□□□□□ -1.1
YBX3-210ENST00000540975 IBSPP21815 317 aaPredicted RBP8.14□□□□□ -1.11
YBX3-210ENST00000540975 PER3P56645 1201 aa8.14□□□□□ -1.11
YBX3-210ENST00000540975 PTH1RQ03431 593 aa8.14□□□□□ -1.11
YBX3-210ENST00000540975 MGAT2Q10469 447 aa8.14□□□□□ -1.11
YBX3-210ENST00000540975 TOB2Q14106 344 aaPredicted RBP8.14□□□□□ -1.11
YBX3-210ENST00000540975 SEPT2Q15019 361 aa8.14□□□□□ -1.11
YBX3-210ENST00000540975 PCBP2Q15366 365 aaKnown RBP eCLIP8.14□□□□□ -1.11
YBX3-210ENST00000540975 ABCB5Q2M3G0 1257 aa8.14□□□□□ -1.11
YBX3-210ENST00000540975 ZNF572Q7Z3I7 529 aaPredicted RBP8.14□□□□□ -1.11
YBX3-210ENST00000540975 TRMT2AQ8IZ69 625 aaKnown RBP8.14□□□□□ -1.11
YBX3-210ENST00000540975 Q8N1X5 172 aa8.14□□□□□ -1.11
YBX3-210ENST00000540975 PQLC1Q8N2U9 271 aa8.14□□□□□ -1.11
YBX3-210ENST00000540975 ZNF341Q9BYN7 854 aa8.14□□□□□ -1.11
YBX3-210ENST00000540975 KCNH6Q9H252 994 aa8.14□□□□□ -1.11
YBX3-210ENST00000540975 SPON1Q9HCB6 807 aa8.14□□□□□ -1.11
YBX3-210ENST00000540975 CLCA2Q9UQC9 943 aa8.14□□□□□ -1.11
YBX3-210ENST00000540975 NOP58Q9Y2X3 529 aaKnown RBP8.14□□□□□ -1.11
YBX3-210ENST00000540975 TNKSO95271 1327 aa8.13□□□□□ -1.11
YBX3-210ENST00000540975 SHTN1A0MZ66 631 aa8.13□□□□□ -1.11
YBX3-210ENST00000540975 PRR5-ARHGAP8B1AHC4 643 aa8.13□□□□□ -1.11
YBX3-210ENST00000540975 B5MCH6 92 aa8.13□□□□□ -1.11
YBX3-210ENST00000540975 FZD9O00144 591 aa8.13□□□□□ -1.11
YBX3-210ENST00000540975 WNT10BO00744 389 aa8.13□□□□□ -1.11
YBX3-210ENST00000540975 C6P13671 934 aa8.13□□□□□ -1.11
YBX3-210ENST00000540975 TACR2P21452 398 aa8.13□□□□□ -1.11
YBX3-210ENST00000540975 FLT3LGP49771 235 aa8.13□□□□□ -1.11
YBX3-210ENST00000540975 SLC25A3Q00325 362 aa8.13□□□□□ -1.11
YBX3-210ENST00000540975 ACAP2Q15057 778 aa8.13□□□□□ -1.11
YBX3-210ENST00000540975 BMT2Q1RMZ1 405 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms