RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 MSL3Q8N5Y2 521 aaKnown RBP6.2□□□□□ -1.42
PRKDC-209ENST00000540819 ASB12Q8WXK4 309 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 ATP6V1E2Q96A05 226 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 HVCN1Q96D96 273 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 SHISA4Q96DD7 197 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 DSCC1Q9BVC3 393 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 C22orf23Q9BZE7 217 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 UNKQ9C0B0 810 aaKnown RBP6.2□□□□□ -1.42
PRKDC-209ENST00000540819 ZMAT4Q9H898 229 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 GCM1Q9NP62 436 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 CATSPERZQ9NTU4 200 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 USP36Q9P275 1121 aaKnown RBP6.2□□□□□ -1.42
PRKDC-209ENST00000540819 TMEFF2Q9UIK5 374 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-209ENST00000540819 CBLCQ9ULV8 474 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 IRAK3Q9Y616 596 aa6.2□□□□□ -1.42
PRKDC-209ENST00000540819 A0A087X0M5 115 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 A0A1B0GX30 115 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 HOXC11O43248 304 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-209ENST00000540819 ZBED4O75132 1171 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 SASH1O94885 1247 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 POLBP06746 335 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 CTNNA1P35221 906 aaKnown RBP6.19□□□□□ -1.42
PRKDC-209ENST00000540819 STAT1P42224 750 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 PCBP3P57721 371 aaKnown RBP6.19□□□□□ -1.42
PRKDC-209ENST00000540819 DCAF7P61962 342 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 MRPS9P82933 396 aaKnown RBP6.19□□□□□ -1.42
PRKDC-209ENST00000540819 GALNT1Q10472 559 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-209ENST00000540819 GRM1Q13255 1194 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 PMS2P11Q13670 270 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 TAF5Q15542 800 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 MPEG1Q2M385 716 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 KIAA1614Q5VZ46 1190 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 CEP128Q6ZU80 1094 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 NLRX1Q86UT6 975 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 LRRTM4Q86VH4 590 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 USHBP1Q8N6Y0 703 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 MARCH10Q8NA82 808 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-209ENST00000540819 DAGLBQ8NCG7 672 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 SIGLEC10Q96LC7 697 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 SLC2A13Q96QE2 648 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 PRDM14Q9GZV8 571 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 QRSL1Q9H0R6 528 aaKnown RBP6.19□□□□□ -1.42
PRKDC-209ENST00000540819 ZCCHC17Q9NP64 241 aaKnown RBP6.19□□□□□ -1.42
PRKDC-209ENST00000540819 PNPLA8Q9NP80 782 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 GPRC5CQ9NQ84 441 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 OLA1Q9NTK5 396 aaKnown RBP6.19□□□□□ -1.42
PRKDC-209ENST00000540819 IRAK4Q9NWZ3 460 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 GFOD1Q9NXC2 390 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 DACT1Q9NYF0 836 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 GPR34Q9UPC5 381 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 CEP83Q9Y592 693 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 BACE2Q9Y5Z0 518 aa6.19□□□□□ -1.42
PRKDC-209ENST00000540819 A0A088AWK7 358 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 PABPN1LA6NDY0 278 aaKnown RBP6.18□□□□□ -1.42
PRKDC-209ENST00000540819 C2orf71A6NGG8 1288 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 ZNF561-AS1K7EIQ3 104 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 ARNTLO00327 626 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 DVL2O14641 736 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 AURKAO14965 403 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 FOXD2O60548 495 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-209ENST00000540819 IL18RAPO95256 599 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 CYP17A1P05093 508 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 PARP1P09874 1014 aaKnown RBP6.18□□□□□ -1.42
PRKDC-209ENST00000540819 CNTFP26441 200 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 HOXC13P31276 330 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 GRK3P35626 688 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 LIFRP42702 1097 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 KIR2DL1P43626 348 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-209ENST00000540819 KIR2DL2P43627 348 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-209ENST00000540819 CEBPAP49715 358 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-209ENST00000540819 WASHC5Q12768 1159 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 MEA1Q16626 185 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 PFKFB4Q16877 469 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 UGT8Q16880 541 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 FBXO47Q5MNV8 452 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 MFSD4BQ5TF39 518 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 MBNL2Q5VZF2 373 aaKnown RBP6.18□□□□□ -1.42
PRKDC-209ENST00000540819 OLFML2BQ68BL8 750 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 GGT6Q6P531 493 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 CASC1Q6TDU7 716 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 CCDC103Q8IW40 242 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 RNF152Q8N8N0 203 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 KLHDC4Q8TBB5 520 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 AFAP1L1Q8TED9 768 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 TCTN2Q96GX1 697 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 PTPN18Q99952 460 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 SEZ6LQ9BYH1 1024 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 FOXP3Q9BZS1 431 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 CNTD2Q9H8S5 307 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 ACSS2Q9NR19 701 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 LRFN1Q9P244 771 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 NFKBIL1Q9UBC1 381 aaPredicted RBP6.18□□□□□ -1.42
PRKDC-209ENST00000540819 SIK3Q9Y2K2 1263 aa6.18□□□□□ -1.42
PRKDC-209ENST00000540819 LCHNA4D1U4 455 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 TISP43B9A030 160 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 B9A039 149 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 STXBP3O00186 592 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 APOL1O14791 398 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 PLA2G6O60733 806 aa6.17□□□□□ -1.42
PRKDC-209ENST00000540819 USP2O75604 605 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms