RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 ME1P48163 572 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 EFNA5P52803 228 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 NCKAP1LP55160 1127 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 OSTNP61366 133 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 TMEM132AQ24JP5 1023 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 TPRNQ4KMQ1 711 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 ZC2HC1CQ53FD0 456 aaPredicted RBP11.78□□□□□ -0.52
HMGA2-209ENST00000539662 HAUS6Q7Z4H7 955 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 MYCT1Q8N699 235 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 LEO1Q8WVC0 666 aaPredicted RBP11.78□□□□□ -0.52
HMGA2-209ENST00000539662 DDX12PQ92771 950 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 ZNF558Q96NG5 402 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 TIPINQ9BVW5 301 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 TRIM6Q9C030 488 aaPredicted RBP11.78□□□□□ -0.52
HMGA2-209ENST00000539662 CDT1Q9H211 546 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 GDPD2Q9HCC8 539 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 RNF216Q9NWF9 866 aaPredicted RBP11.78□□□□□ -0.52
HMGA2-209ENST00000539662 KCND2Q9NZV8 630 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 TBC1D7Q9P0N9 293 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 STK17AQ9UEE5 414 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 GDAQ9Y2T3 454 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 PCDHB12Q9Y5F1 795 aa11.78□□□□□ -0.52
HMGA2-209ENST00000539662 TISP43B9A030 160 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 PTGESO14684 152 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 N4BP3O15049 544 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 PER2O15055 1255 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 INPPL1O15357 1258 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 RECQL4O94761 1208 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 FAM13AO94988 1023 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 KRT18P05783 430 aaKnown RBP11.77□□□□□ -0.53
HMGA2-209ENST00000539662 PROZP22891 400 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 STAT6P42226 847 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 DLX2Q07687 328 aaPredicted RBP11.77□□□□□ -0.53
HMGA2-209ENST00000539662 NCBP1Q09161 790 aaKnown RBP11.77□□□□□ -0.53
HMGA2-209ENST00000539662 KCNA1Q09470 495 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 HYAL1Q12794 435 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
HMGA2-209ENST00000539662 BECN1Q14457 450 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 RESP18Q5W5W9 173 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 SFR1Q86XK3 245 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 COLGALT2Q8IYK4 626 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 CNNM3Q8NE01 707 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 AUTS2Q8WXX7 1259 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 HPS3Q969F9 1004 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 DHX58Q96C10 678 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 PAAF1Q9BRP4 392 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 MRPL9Q9BYD2 267 aaKnown RBP11.77□□□□□ -0.53
HMGA2-209ENST00000539662 IGFLR1Q9H665 355 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 C17orf75Q9HAS0 396 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 PARVGQ9HBI0 331 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 AAASQ9NRG9 546 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 MARCH5Q9NX47 278 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 ODF2LQ9ULJ1 636 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 TNFSF13BQ9Y275 285 aa11.77□□□□□ -0.53
HMGA2-209ENST00000539662 TCF20Q9UGU0 1960 aaKnown RBP11.77□□□□□ -0.53
HMGA2-209ENST00000539662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
HMGA2-209ENST00000539662 HIDE1A8MVS5 230 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 K7ENM7 598 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 NRP1O14786 923 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 FSCN2O14926 492 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 TRAK2O60296 914 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 HARSP12081 509 aaKnown RBP11.76□□□□□ -0.53
HMGA2-209ENST00000539662 PDIA4P13667 645 aaKnown RBP11.76□□□□□ -0.53
HMGA2-209ENST00000539662 LTBRP36941 435 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 TXLNAP40222 546 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 KCNQ1P51787 676 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 CASP5P51878 434 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 PLCB3Q01970 1234 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 RNASELQ05823 741 aaKnown RBP11.76□□□□□ -0.53
HMGA2-209ENST00000539662 DSC1Q08554 894 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 NAB2Q15742 525 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 PTPROQ16827 1216 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 GLRA4Q5JXX5 417 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 ZBTB41Q5SVQ8 909 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 PLPP4Q5VZY2 271 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 SLC39A4Q6P5W5 647 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 CCDC73Q6ZRK6 1079 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 SV2BQ7L1I2 683 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 TAS1R1Q7RTX1 841 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 RBM23Q86U06 439 aaKnown RBP11.76□□□□□ -0.53
HMGA2-209ENST00000539662 GRAMD1CQ8IYS0 662 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 GLIS3Q8NEA6 775 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 VN1R2Q8NFZ6 395 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 URGCPQ8TCY9 931 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 KCNG4Q8TDN1 519 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 MRPS27Q92552 414 aaKnown RBP11.76□□□□□ -0.53
HMGA2-209ENST00000539662 IGSF21Q96ID5 467 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 MRPL4Q9BYD3 311 aaKnown RBP11.76□□□□□ -0.53
HMGA2-209ENST00000539662 LMAN2LQ9H0V9 348 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 NSUN3Q9H649 340 aaKnown RBP11.76□□□□□ -0.53
HMGA2-209ENST00000539662 SPG21Q9NZD8 308 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 CFAP45Q9UL16 551 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 TBX20Q9UMR3 447 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 GIT1Q9Y2X7 761 aa11.76□□□□□ -0.53
HMGA2-209ENST00000539662 PRG3Q9Y2Y8 225 aaPredicted RBP11.76□□□□□ -0.53
HMGA2-209ENST00000539662 RBM19Q9Y4C8 960 aaKnown RBP11.76□□□□□ -0.53
HMGA2-209ENST00000539662 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.75□□□□□ -0.53
HMGA2-209ENST00000539662 A0A1B0GVL5 298 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 ANKRD63C9JTQ0 380 aa11.75□□□□□ -0.53
HMGA2-209ENST00000539662 POLR2DO15514 142 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms