RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 ALCAMQ13740 583 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 DCAF4L1Q3SXM0 396 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 ZNF568Q3ZCX4 644 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 SLC39A4Q6P5W5 647 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 MPZL3Q6UWV2 235 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 EPM2AIP1Q7L775 607 aaPredicted RBP13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 CEP120Q8N960 986 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 HELQQ8TDG4 1101 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 ERCC4Q92889 916 aaPredicted RBP13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 CASD1Q96PB1 797 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 ACCSQ96QU6 501 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 TCHPQ9BT92 498 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 HAPLN2Q9GZV7 340 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 SNTG2Q9NY99 539 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 ANKFY1Q9P2R3 1169 aa13.93□□□□□ -0.18
TSPAN9-207ENST00000539631 CITO14578 2027 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 LINC01553A4QN01 128 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 TISP43B9A030 160 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 GOLGA6L22H0YM25 854 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 HNRNPDLO14979 420 aaKnown RBP13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 HOXA2O43364 376 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 OFD1O75665 1012 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 TOM1L1O75674 476 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 AKAP5P24588 427 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 TAP1Q03518 808 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 STK4Q13043 487 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 PSMD2Q13200 908 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 BTG3Q14201 252 aaPredicted RBP13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 SPRED2Q7Z698 418 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 ELOA2Q8IYF1 753 aaPredicted RBP13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 CMTR2Q8IYT2 770 aaKnown RBP13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 HACE1Q8IYU2 909 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 ABI1Q8IZP0 508 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 KIAA0895Q8NCT3 520 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 ZNF507Q8TCN5 953 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 CCDC47Q96A33 483 aaKnown RBP13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 TMEM117Q9H0C3 514 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 RSAD1Q9HA92 442 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 SLC28A3Q9HAS3 691 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 HCSTQ9UBK5 93 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 PARP2Q9UGN5 583 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 EXOC7Q9UPT5 735 aa13.92□□□□□ -0.18
TSPAN9-207ENST00000539631 PDCD11Q14690 1871 aaKnown RBP13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 EIF3DO15371 548 aaKnown RBP eCLIP13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 CLDN3O15551 220 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 RHOBTB3O94955 611 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 MCF2P10911 925 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 HOXD13P35453 343 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 AFF1P51825 1210 aaKnown RBP13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 OSTNP61366 133 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 MCL1Q07820 350 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 KCNB1Q14721 858 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 NOLC1Q14978 699 aaKnown RBP eCLIP13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 SEZ6Q53EL9 994 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 PPP2R2DQ66LE6 453 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 GLB1LQ6UWU2 654 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 LRRC55Q6ZSA7 311 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 STXBP4Q6ZWJ1 553 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 APBB1IPQ7Z5R6 666 aaPredicted RBP13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 NELFCDQ8IXH7 590 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 TMEM192Q8IY95 271 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 THNSL1Q8IYQ7 743 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 SYCP3Q8IZU3 236 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 FIBCD1Q8N539 461 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 SCFD1Q8WVM8 642 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 TMEM206Q9H813 350 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 UBN1Q9NPG3 1134 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 KLK14Q9P0G3 267 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 HOOK1Q9UJC3 728 aaKnown RBP13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 INPP5FQ9Y2H2 1132 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 GDAQ9Y2T3 454 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 PCDHA5Q9Y5H7 936 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 MRPL42Q9Y6G3 142 aaKnown RBP13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 ZMYM2Q9UBW7 1377 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 ANK1P16157 1881 aa13.91□□□□□ -0.18
TSPAN9-207ENST00000539631 RECQL4O94761 1208 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 LINC00271P0C7V0 271 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 MLH1P40692 756 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 GRM5P41594 1212 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 NOMO2Q5JPE7 1267 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 GPT2Q8TD30 523 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 SMARCE1Q969G3 411 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 ZFP42Q96MM3 310 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 GAD1Q99259 594 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 C17orf80Q9BSJ5 609 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 CXCL16Q9H2A7 254 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 TTYH1Q9H313 450 aaPredicted RBP13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 ZNF576Q9H609 170 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 CWH43Q9H720 699 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 CERS4Q9HA82 394 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 TYW1Q9NV66 732 aaKnown RBP13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 MIOSQ9NXC5 875 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 GIT1Q9Y2X7 761 aa13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 COL4A4P53420 1690 aaPredicted RBP13.9□□□□□ -0.18
TSPAN9-207ENST00000539631 UBE4BO95155 1302 aa13.9□□□□□ -0.19
TSPAN9-207ENST00000539631 PLXNA4Q9HCM2 1894 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 A0A0B4J269 797 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 ARL5CA6NH57 179 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 SMC2O95347 1197 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 POMCP01189 267 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms