RNA–Protein interactions for RNA: ENST00000539357.1

POLE-213, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 364 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-213	ENST00000539357	ZNF213	O14771	459 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	ADAM12	O43184	909 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	FCAR	P24071	287 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	FAM193A	P78312	1265 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	SIM1	P81133	766 aa	Predicted RBP	13.92	□□□□□ -0.18
POLE-213	ENST00000539357	NMI	Q13287	307 aa	Predicted RBP	13.92	□□□□□ -0.18
POLE-213	ENST00000539357	GRM4	Q14833	912 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	PABPC1L	Q4VXU2	614 aa	Known RBP	13.92	□□□□□ -0.18
POLE-213	ENST00000539357	FAM160B1	Q5W0V3	765 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.92	□□□□□ -0.18
POLE-213	ENST00000539357	PLEKHM2	Q8IWE5	1019 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	LINC01465	Q8N7H1	131 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	LOXL4	Q96JB6	756 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	AGO4	Q9HCK5	861 aa	Known RBP	13.92	□□□□□ -0.18
POLE-213	ENST00000539357	HELLS	Q9NRZ9	838 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	FBXW11	Q9UKB1	542 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	PCDHA6	Q9UN73	950 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	INVS	Q9Y283	1065 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	SSX2IP	Q9Y2D8	614 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	MRPS23	Q9Y3D9	190 aa	Known RBP	13.92	□□□□□ -0.18
POLE-213	ENST00000539357	PCDHA8	Q9Y5H6	950 aa		13.92	□□□□□ -0.18
POLE-213	ENST00000539357	NCAN	O14594	1321 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	THADA	Q6YHU6	1953 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357		A0A087WZ62	844 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	hCG_1642624	A0A1W2PR95	340 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	CAVIN2	O95810	425 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	EFEMP2	O95967	443 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	CSRP1	P21291	193 aa	Known RBP	13.91	□□□□□ -0.18
POLE-213	ENST00000539357	KIF5B	P33176	963 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	PLK5	Q496M5	336 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	MCMDC2	Q4G0Z9	681 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	CCDC178	Q5BJE1	867 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	TXNDC11	Q6PKC3	985 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	CYB5R4	Q7L1T6	521 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	COLGALT2	Q8IYK4	626 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	SLC7A14	Q8TBB6	771 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	DNASE1L2	Q92874	299 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	MXRA8	Q9BRK3	442 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.91	□□□□□ -0.18
POLE-213	ENST00000539357	TMEM175	Q9BSA9	504 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	UBAC1	Q9BSL1	405 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.91	□□□□□ -0.18
POLE-213	ENST00000539357	TMEM9B	Q9NQ34	198 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	CHST7	Q9NS84	486 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	PCDHB2	Q9Y5E7	798 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	RAI2	Q9Y5P3	530 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	MYO18B	Q8IUG5	2567 aa		13.91	□□□□□ -0.18
POLE-213	ENST00000539357	NFASC	O94856	1347 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	SLC38A8	A6NNN8	435 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	VIPR2	P41587	438 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	SLC26A2	P50443	739 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	SEC23A	Q15436	765 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	FAM78A	Q5JUQ0	283 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	LIN9	Q5TKA1	542 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	VIT	Q6UXI7	678 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	ZNF605	Q86T29	641 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	SLC39A7	Q92504	469 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	TCEAL4	Q96EI5	215 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	MBOAT7	Q96N66	472 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	IER2	Q9BTL4	223 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	TRMT61B	Q9BVS5	477 aa	Known RBP	13.9	□□□□□ -0.18
POLE-213	ENST00000539357	RSAD1	Q9HA92	442 aa		13.9	□□□□□ -0.18
POLE-213	ENST00000539357	PIK3CD	O00329	1044 aa		13.89	□□□□□ -0.19
POLE-213	ENST00000539357	RTP2	Q5QGT7	225 aa		13.89	□□□□□ -0.19
POLE-213	ENST00000539357	MAP4K3	Q8IVH8	894 aa		13.89	□□□□□ -0.19
POLE-213	ENST00000539357	KSR1	Q8IVT5	923 aa		13.89	□□□□□ -0.19
POLE-213	ENST00000539357	CMTR1	Q8N1G2	835 aa	Known RBP	13.89	□□□□□ -0.19
POLE-213	ENST00000539357	HASPIN	Q8TF76	798 aa		13.89	□□□□□ -0.19
POLE-213	ENST00000539357	ELSPBP1	Q96BH3	223 aa		13.89	□□□□□ -0.19
POLE-213	ENST00000539357	ZSWIM3	Q96MP5	696 aa		13.89	□□□□□ -0.19
POLE-213	ENST00000539357	CLSTN3	Q9BQT9	956 aa		13.89	□□□□□ -0.19
POLE-213	ENST00000539357	SH2D3A	Q9BRG2	576 aa		13.89	□□□□□ -0.19
POLE-213	ENST00000539357	PCDHGA5	Q9Y5G8	931 aa		13.89	□□□□□ -0.19
POLE-213	ENST00000539357	VWA8	A3KMH1	1905 aa		13.89	□□□□□ -0.19
POLE-213	ENST00000539357	PC	P11498	1178 aa	Known RBP	13.88	□□□□□ -0.19
POLE-213	ENST00000539357	MAPK8	P45983	427 aa		13.88	□□□□□ -0.19
POLE-213	ENST00000539357	IRX4	P78413	519 aa		13.88	□□□□□ -0.19
POLE-213	ENST00000539357	TRAF1	Q13077	416 aa		13.88	□□□□□ -0.19
POLE-213	ENST00000539357	PON2	Q15165	354 aa		13.88	□□□□□ -0.19
POLE-213	ENST00000539357	FUT10	Q6P4F1	479 aa		13.88	□□□□□ -0.19
POLE-213	ENST00000539357	CEP57	Q86XR8	500 aa		13.88	□□□□□ -0.19
POLE-213	ENST00000539357	RNF39	Q9H2S5	420 aa		13.88	□□□□□ -0.19
POLE-213	ENST00000539357	CCDC86	Q9H6F5	360 aa	Known RBP	13.88	□□□□□ -0.19
POLE-213	ENST00000539357	PSTPIP2	Q9H939	334 aa		13.88	□□□□□ -0.19
POLE-213	ENST00000539357	GABBR1	Q9UBS5	961 aa		13.88	□□□□□ -0.19
POLE-213	ENST00000539357	ZNF462	Q96JM2	2506 aa		13.88	□□□□□ -0.19
POLE-213	ENST00000539357	TTC41P	Q6P2S7	1318 aa		13.88	□□□□□ -0.19
POLE-213	ENST00000539357	ACACA	Q13085	2346 aa		13.87	□□□□□ -0.19
POLE-213	ENST00000539357	URB1	O60287	2271 aa	Known RBP	13.87	□□□□□ -0.19
POLE-213	ENST00000539357	MAFG	O15525	162 aa		13.87	□□□□□ -0.19
POLE-213	ENST00000539357	ARHGAP6	O43182	974 aa		13.87	□□□□□ -0.19
POLE-213	ENST00000539357	XYLB	O75191	536 aa		13.87	□□□□□ -0.19
POLE-213	ENST00000539357	PAPSS2	O95340	614 aa	Predicted RBP	13.87	□□□□□ -0.19
POLE-213	ENST00000539357	RHO	P08100	348 aa		13.87	□□□□□ -0.19
POLE-213	ENST00000539357	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
POLE-213	ENST00000539357	TMOD1	P28289	359 aa		13.87	□□□□□ -0.19
POLE-213	ENST00000539357	SCNN1G	P51170	649 aa		13.87	□□□□□ -0.19
POLE-213	ENST00000539357	USP41	Q3LFD5	358 aa		13.87	□□□□□ -0.19
POLE-213	ENST00000539357	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.87	□□□□□ -0.19
POLE-213	ENST00000539357	CATSPER4	Q7RTX7	472 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms