RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 C11orf84Q9BUA3 381 aaPredicted RBP16.48■□□□□ 0.23
PRPF19-203ENST00000539180 GOLPH3LQ9H4A5 285 aa16.48■□□□□ 0.23
PRPF19-203ENST00000539180 UBN1Q9NPG3 1134 aa16.48■□□□□ 0.23
PRPF19-203ENST00000539180 MTCH2Q9Y6C9 303 aa16.48■□□□□ 0.23
PRPF19-203ENST00000539180 ABCD1P33897 745 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 EHHADHQ08426 723 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 STRN3Q13033 797 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 GPM6BQ13491 265 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 ZNF568Q3ZCX4 644 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 MPZL3Q6UWV2 235 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 HACE1Q8IYU2 909 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 CEP120Q8N960 986 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 SLC17A8Q8NDX2 589 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 MRPS27Q92552 414 aaKnown RBP16.47■□□□□ 0.23
PRPF19-203ENST00000539180 HVCN1Q96D96 273 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 ZFP42Q96MM3 310 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 C7orf25Q9BPX7 421 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 FGFBP2Q9BYJ0 223 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 LRRC27Q9C0I9 530 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 ZHX3Q9H4I2 956 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 LMCD1Q9NZU5 365 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 TBX20Q9UMR3 447 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 INPP5FQ9Y2H2 1132 aa16.47■□□□□ 0.23
PRPF19-203ENST00000539180 ARL5CA6NH57 179 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 TOM1L1O75674 476 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 RECQL4O94761 1208 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 ITGB1P05556 798 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 SLFN14P0C7P3 912 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 MCF2P10911 925 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 AKAP5P24588 427 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 NDUFA8P51970 172 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 DSC1Q08554 894 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 COASYQ13057 564 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 TMEM132AQ24JP5 1023 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 SLC39A4Q6P5W5 647 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 ZNF720Q7Z2F6 126 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 KLHL23Q8NBE8 558 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 URGCPQ8TCY9 931 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 GAD1Q99259 594 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 APOL6Q9BWW8 343 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 HAPLN2Q9GZV7 340 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 LMAN2LQ9H0V9 348 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 NRDE2Q9H7Z3 1164 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 CHMP5Q9NZZ3 219 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 USP25Q9UHP3 1055 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 SERTAD1Q9UHV2 236 aa16.46■□□□□ 0.23
PRPF19-203ENST00000539180 PTGESO14684 152 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 GRM6O15303 877 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 FAM189A1O60320 539 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 IDEP14735 1019 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 PBX3P40426 434 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 GRM5P41594 1212 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 SCNN1GP51170 649 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 CASP5P51878 434 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 AMPD3Q01432 767 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 MCL1Q07820 350 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 CAMK1Q14012 370 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 NOLC1Q14978 699 aaKnown RBP eCLIP16.45■□□□□ 0.22
PRPF19-203ENST00000539180 CSPP1Q1MSJ5 1256 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 ZC2HC1CQ53FD0 456 aaPredicted RBP16.45■□□□□ 0.22
PRPF19-203ENST00000539180 KCNT2Q6UVM3 1135 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 SLC39A11Q8N1S5 342 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 FSIP1Q8NA03 581 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 MAFAQ8NHW3 353 aaPredicted RBP16.45■□□□□ 0.22
PRPF19-203ENST00000539180 MRPL38Q96DV4 380 aaKnown RBP16.45■□□□□ 0.22
PRPF19-203ENST00000539180 ZBTB45Q96K62 511 aaPredicted RBP16.45■□□□□ 0.22
PRPF19-203ENST00000539180 ZNF558Q96NG5 402 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 AAASQ9NRG9 546 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 PANK4Q9NVE7 773 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 MIOSQ9NXC5 875 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 SNTG2Q9NY99 539 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 DNAJB4Q9UDY4 337 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 PLAGL2Q9UPG8 496 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 EYSQ5T1H1 3165 aa16.45■□□□□ 0.22
PRPF19-203ENST00000539180 HNRNPDLO14979 420 aaKnown RBP16.44■□□□□ 0.22
PRPF19-203ENST00000539180 MEFVO15553 781 aaPredicted RBP16.44■□□□□ 0.22
PRPF19-203ENST00000539180 GTPBP6O43824 516 aaPredicted RBP16.44■□□□□ 0.22
PRPF19-203ENST00000539180 ZC3H11AO75152 810 aaKnown RBP eCLIP16.44■□□□□ 0.22
PRPF19-203ENST00000539180 DDHD2O94830 711 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 IGFBP4P22692 258 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 DNAJB1P25685 340 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 CASP1P29466 404 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 PPM1AP35813 382 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 SYKP43405 635 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 BCAR1P56945 870 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 ASIC1P78348 528 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 PLCB3Q01970 1234 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 GRIK3Q13003 919 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 ALCAMQ13740 583 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 SPOUT1Q5T280 376 aaKnown RBP16.44■□□□□ 0.22
PRPF19-203ENST00000539180 UNC13DQ70J99 1090 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 APBB1IPQ7Z5R6 666 aaPredicted RBP16.44■□□□□ 0.22
PRPF19-203ENST00000539180 TMEM173Q86WV6 379 aaPredicted RBP16.44■□□□□ 0.22
PRPF19-203ENST00000539180 ZNF280BQ86YH2 543 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 CCDC65Q8IXS2 484 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 GRAMD1CQ8IYS0 662 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 CEP57L1Q8IYX8 460 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 SPPL3Q8TCT6 385 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 TMEM175Q9BSA9 504 aa16.44■□□□□ 0.22
PRPF19-203ENST00000539180 CXCL16Q9H2A7 254 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms