RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	SLC11A1	P49279	550 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	NCKAP1L	P55160	1127 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	GRIN1	Q05586	938 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	COASY	Q13057	564 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ARSH	Q5FYA8	562 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	NT5DC1	Q5TFE4	455 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ATF7IP2	Q5U623	682 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	TMC7	Q7Z402	723 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ZNF280B	Q86YH2	543 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	RNF168	Q8IYW5	571 aa	Predicted RBP	13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	TMEM161B	Q8NDZ6	487 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	MSLNL	Q96KJ4	702 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	TCF25	Q9BQ70	676 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ZBP1	Q9H171	429 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	RNF39	Q9H2S5	420 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	NXF3	Q9H4D5	531 aa	Known RBP	13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	ST6GALNAC4	Q9H4F1	302 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	CLDND1	Q9NY35	253 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	INPP5F	Q9Y2H2	1132 aa		13.53	□□□□□ -0.24
CLTCL1-205	ENST00000538828	MYH15	Q9Y2K3	1946 aa		13.52	□□□□□ -0.24
CLTCL1-205	ENST00000538828	NRP1	O14786	923 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TOM1L1	O75674	476 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	MAPT	P10636	758 aa	Known RBP	13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	MCF2	P10911	925 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	MLH1	P40692	756 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	GRM5	P41594	1212 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	KCNQ1	P51787	676 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	STRN3	Q13033	797 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SMAD4	Q13485	552 aa	Known RBP	13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	ZRSR1	Q15695	479 aa	Known RBP	13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	KYAT1	Q16773	422 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	XKR4	Q5GH76	650 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	CCDC73	Q6ZRK6	1079 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TAS1R3	Q7RTX0	852 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	ADGRD2	Q7Z7M1	963 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	PPFIBP1	Q86W92	1011 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	GPBP1	Q86WP2	473 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	VPS52	Q8N1B4	723 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	RPS6KC1	Q96S38	1066 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	UHRF1	Q96T88	793 aa	Predicted RBP	13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	COLEC11	Q9BWP8	271 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	PARVG	Q9HBI0	331 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	ENTPD7	Q9NQZ7	604 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	DNAJB4	Q9UDY4	337 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	HES2	Q9Y543	173 aa		13.52	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TCF20	Q9UGU0	1960 aa	Known RBP	13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	C2orf71	A6NGG8	1288 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TTLL13P	A6NNM8	815 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TNFRSF10A	O00220	468 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SPTLC2	O15270	562 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	F13A1	P00488	732 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	POMC	P01189	267 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	PIGR	P01833	764 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SSB	P05455	408 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TH	P07101	528 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	MARCKS	P29966	332 aa	Predicted RBP	13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	NRIP1	P48552	1158 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SCNN1G	P51170	649 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	AFF1	P51825	1210 aa	Known RBP	13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TUSC3	Q13454	348 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	KARS	Q15046	597 aa	Known RBP	13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TMEM132A	Q24JP5	1023 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	LONRF3	Q496Y0	759 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	RRAGB	Q5VZM2	374 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	EEF1DP3	Q658K8	133 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	MPZL3	Q6UWV2	235 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SMRP1	Q8NCR6	262 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	RASSF8	Q8NHQ8	419 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	KCNG4	Q8TDN1	519 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	EPSTI1	Q96J88	318 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	ZFP42	Q96MM3	310 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TSPAN18	Q96SJ8	248 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	REEP2	Q9BRK0	252 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	KIFC3	Q9BVG8	833 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	CCDC94	Q9BW85	323 aa	Predicted RBP	13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	CUEDC2	Q9H467	287 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	MIOS	Q9NXC5	875 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SEL1L	Q9UBV2	794 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	PARP2	Q9UGN5	583 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	CD207	Q9UJ71	328 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	CFAP45	Q9UL16	551 aa		13.51	□□□□□ -0.25
CLTCL1-205	ENST00000538828	NT5C1B-RDH14	C9J2C7	533 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TMEM189-UBE2V1	I3L0A0	370 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	ABLIM1	O14639	778 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SLC16A4	O15374	487 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	B4GALT3	O60512	393 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	LILRB3	O75022	631 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	TBX10	O75333	385 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	RECQL4	O94761	1208 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	FAM13A	O94988	1023 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	SOD2	P04179	222 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	EDN1	P05305	212 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	AKAP5	P24588	427 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	PBX3	P40426	434 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	NDUFV1	P49821	464 aa		13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	POU5F1	Q01860	360 aa	Known RBP	13.5	□□□□□ -0.25
CLTCL1-205	ENST00000538828	MCL1	Q07820	350 aa		13.5	□□□□□ -0.25

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