RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 DEPTORQ8TB45 409 aa16.9■□□□□ 0.3
MKS1-204ENST00000537529 HELQQ8TDG4 1101 aa16.9■□□□□ 0.3
MKS1-204ENST00000537529 EPS8L1Q8TE68 723 aa16.9■□□□□ 0.3
MKS1-204ENST00000537529 ZNF526Q8TF50 670 aaPredicted RBP16.9■□□□□ 0.3
MKS1-204ENST00000537529 SCFD2Q8WU76 684 aa16.9■□□□□ 0.3
MKS1-204ENST00000537529 SLC7A3Q8WY07 619 aa16.9■□□□□ 0.3
MKS1-204ENST00000537529 GDAP1L1Q96MZ0 367 aa16.9■□□□□ 0.3
MKS1-204ENST00000537529 POP1Q99575 1024 aaKnown RBP16.9■□□□□ 0.3
MKS1-204ENST00000537529 HINFPQ9BQA5 517 aa16.9■□□□□ 0.3
MKS1-204ENST00000537529 FAM213AQ9BRX8 229 aa16.9■□□□□ 0.3
MKS1-204ENST00000537529 NIFKQ9BYG3 293 aaKnown RBP16.9■□□□□ 0.3
MKS1-204ENST00000537529 ELP3Q9H9T3 547 aa16.9■□□□□ 0.3
MKS1-204ENST00000537529 VPS18Q9P253 973 aa16.9■□□□□ 0.3
MKS1-204ENST00000537529 PTPRFP10586 1907 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 SOWAHBA6NEL2 793 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 CCDC188H7C350 402 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 ZC3H11AO75152 810 aaKnown RBP eCLIP16.89■□□□□ 0.29
MKS1-204ENST00000537529 SGPL1O95470 568 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 FTLP02792 175 aaPredicted RBP16.89■□□□□ 0.29
MKS1-204ENST00000537529 DLATP10515 647 aaKnown RBP16.89■□□□□ 0.29
MKS1-204ENST00000537529 NEDD9Q14511 834 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 ENOSF1Q7L5Y1 443 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 NOP9Q86U38 636 aaKnown RBP16.89■□□□□ 0.29
MKS1-204ENST00000537529 ERO1BQ86YB8 467 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 TAS1R2Q8TE23 839 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 CAVIN3Q969G5 261 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 TMEM143Q96AN5 459 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 OTUD5Q96G74 571 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 FAM81BQ96LP2 452 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 MPHOSPH6Q99547 160 aaKnown RBP16.89■□□□□ 0.29
MKS1-204ENST00000537529 CXCL11O14625 94 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 PEX10O60683 326 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 FARP2O94887 1054 aaPredicted RBP16.89■□□□□ 0.29
MKS1-204ENST00000537529 GLI1P08151 1106 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 GPC5P78333 572 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 GUCY2DQ02846 1103 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 SV2AQ7L0J3 742 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 KLHL7Q8IXQ5 586 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 ASAP3Q8TDY4 903 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 EXOC4Q96A65 974 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 PAGR1Q9BTK6 254 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.89■□□□□ 0.29
MKS1-204ENST00000537529 NRBP2Q9NSY0 501 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 RNF181Q9P0P0 153 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 CTTNBP2NLQ9P2B4 639 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 FAN1Q9Y2M0 1017 aa16.89■□□□□ 0.29
MKS1-204ENST00000537529 LRRIQ4A6NIV6 560 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 IRF6O14896 467 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 CYP26A1O43174 497 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 PIGRP01833 764 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 GZMAP12544 262 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 CHRNB2P17787 502 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 GLRA2P23416 452 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 NF2P35240 595 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 COPB2P35606 906 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 ARL2P36404 184 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 PDE6CP51160 858 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 PSMD6Q15008 389 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 C11orf63Q6NUN7 778 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 EPB41L5Q9HCM4 733 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.88■□□□□ 0.29
MKS1-204ENST00000537529 TTC7AQ9ULT0 858 aaPredicted RBP16.88■□□□□ 0.29
MKS1-204ENST00000537529 STYXL1Q9Y6J8 313 aa16.88■□□□□ 0.29
MKS1-204ENST00000537529 ZC3H4Q9UPT8 1303 aaKnown RBP16.87■□□□□ 0.29
MKS1-204ENST00000537529 GSTTP1A0A1W2PQM5 241 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 GOLGA6BA6NDN3 693 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 RAD51CO43502 376 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 SLC25A27O95847 323 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 TGFB3P10600 412 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 CYP2C19P33261 490 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 PRPF4BQ13523 1007 aaKnown RBP16.87■□□□□ 0.29
MKS1-204ENST00000537529 TAF3Q5VWG9 929 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 SLFN12LQ6IEE8 588 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 ANKRD13AQ8IZ07 590 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 PSPC1Q8WXF1 523 aaKnown RBP16.87■□□□□ 0.29
MKS1-204ENST00000537529 ASCC2Q9H1I8 757 aaPredicted RBP16.87■□□□□ 0.29
MKS1-204ENST00000537529 ADAM21Q9UKJ8 722 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 KRIT1O00522 736 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 DDX3YO15523 660 aaKnown RBP16.87■□□□□ 0.29
MKS1-204ENST00000537529 CLSTN1O94985 981 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 GCNT1Q02742 428 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 CLUL1Q15846 466 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 SLC47A2Q86VL8 602 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 AFAP1L1Q8TED9 768 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 FNBP1Q96RU3 617 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 PCDHB18PQ96TA0 734 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 C1orf112Q9NSG2 853 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 AGO2Q9UKV8 859 aaKnown RBP16.87■□□□□ 0.29
MKS1-204ENST00000537529 COG5Q9UP83 839 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 PPME1Q9Y570 386 aa16.87■□□□□ 0.29
MKS1-204ENST00000537529 SBF1O95248 1867 aa16.86■□□□□ 0.29
MKS1-204ENST00000537529 SPDYE5A6NIY4 337 aa16.86■□□□□ 0.29
MKS1-204ENST00000537529 K7ERI5 159 aa16.86■□□□□ 0.29
MKS1-204ENST00000537529 CNMDO75829 334 aa16.86■□□□□ 0.29
MKS1-204ENST00000537529 CYP11B1P15538 503 aa16.86■□□□□ 0.29
MKS1-204ENST00000537529 CLDN10P78369 228 aa16.86■□□□□ 0.29
MKS1-204ENST00000537529 CDR2Q01850 454 aa16.86■□□□□ 0.29
MKS1-204ENST00000537529 METTL7BQ6UX53 244 aa16.86■□□□□ 0.29
MKS1-204ENST00000537529 FAM167AQ96KS9 214 aa16.86■□□□□ 0.29
MKS1-204ENST00000537529 CEP89Q96ST8 783 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms