RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 HPSEQ9Y251 543 aa21.12■□□□□ 0.97
COPS7A-205ENST00000536872 RWDD3Q9Y3V2 267 aa21.12■□□□□ 0.97
COPS7A-205ENST00000536872 COL4A6Q14031 1691 aa21.12■□□□□ 0.97
COPS7A-205ENST00000536872 PRRC2BQ5JSZ5 2229 aaKnown RBP21.11■□□□□ 0.97
COPS7A-205ENST00000536872 ACTN4O43707 911 aaKnown RBP21.11■□□□□ 0.97
COPS7A-205ENST00000536872 LINC00271P0C7V0 271 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 PBX3P40426 434 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 MLH1P40692 756 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 DCAF4L1Q3SXM0 396 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 ZNF720Q7Z2F6 126 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 APBB1IPQ7Z5R6 666 aaPredicted RBP21.11■□□□□ 0.97
COPS7A-205ENST00000536872 PPM1EQ8WY54 764 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 HPS3Q969F9 1004 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 PAGE5Q96GU1 130 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 IPO9Q96P70 1041 aaKnown RBP21.11■□□□□ 0.97
COPS7A-205ENST00000536872 FIZ1Q96SL8 496 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 C7orf25Q9BPX7 421 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 UBN1Q9NPG3 1134 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 AAASQ9NRG9 546 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 SEL1LQ9UBV2 794 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 PCDHB12Q9Y5F1 795 aa21.11■□□□□ 0.97
COPS7A-205ENST00000536872 ARL5CA6NH57 179 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 GCNT3O95395 438 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 LIG4P49917 911 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 COASYQ13057 564 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 CUL4BQ13620 913 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 THNSL1Q8IYQ7 743 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 KLHL23Q8NBE8 558 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 COLGALT1Q8NBJ5 622 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 ZFP42Q96MM3 310 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 FAM193BQ96PV7 902 aaPredicted RBP21.1■□□□□ 0.97
COPS7A-205ENST00000536872 MRPL9Q9BYD2 267 aaKnown RBP21.1■□□□□ 0.97
COPS7A-205ENST00000536872 CDT1Q9H211 546 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 ALG13Q9NP73 1137 aaKnown RBP21.1■□□□□ 0.97
COPS7A-205ENST00000536872 TBC1D13Q9NVG8 400 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 MIOSQ9NXC5 875 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 USP25Q9UHP3 1055 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 GIT1Q9Y2X7 761 aa21.1■□□□□ 0.97
COPS7A-205ENST00000536872 CHD7Q9P2D1 2997 aa21.09■□□□□ 0.97
COPS7A-205ENST00000536872 HNRNPDLO14979 420 aaKnown RBP21.09■□□□□ 0.97
COPS7A-205ENST00000536872 GTPBP6O43824 516 aaPredicted RBP21.09■□□□□ 0.97
COPS7A-205ENST00000536872 LPXNO60711 386 aa21.09■□□□□ 0.97
COPS7A-205ENST00000536872 ZC3H11AO75152 810 aaKnown RBP eCLIP21.09■□□□□ 0.97
COPS7A-205ENST00000536872 ZNF202O95125 648 aa21.09■□□□□ 0.97
COPS7A-205ENST00000536872 RB1P06400 928 aa21.09■□□□□ 0.97
COPS7A-205ENST00000536872 MYBP10242 640 aa21.09■□□□□ 0.97
COPS7A-205ENST00000536872 SCNN1GP51170 649 aa21.09■□□□□ 0.97
COPS7A-205ENST00000536872 GTF2BQ00403 316 aa21.09■□□□□ 0.97
COPS7A-205ENST00000536872 CCDC85BQ15834 202 aaPredicted RBP21.09■□□□□ 0.97
COPS7A-205ENST00000536872 MPZL3Q6UWV2 235 aa21.09■□□□□ 0.97
COPS7A-205ENST00000536872 ZNF280BQ86YH2 543 aa21.09■□□□□ 0.97
COPS7A-205ENST00000536872 SLC17A8Q8NDX2 589 aa21.09■□□□□ 0.97
COPS7A-205ENST00000536872 PTPRHQ9HD43 1115 aa21.09■□□□□ 0.97
COPS7A-205ENST00000536872 NLRC5Q86WI3 1866 aa21.09■□□□□ 0.97
COPS7A-205ENST00000536872 FAM237AA0A1B0GTK4 181 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 FRMD3A2A2Y4 597 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 NT5C1B-RDH14C9J2C7 533 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 H3BNC9 293 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 GRM6O15303 877 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 CLDN3O15551 220 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 TOM1L1O75674 476 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 RECQL4O94761 1208 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 LAG3P18627 525 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 CSPP1Q1MSJ5 1256 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 SEZ6Q53EL9 994 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 KCNT2Q6UVM3 1135 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 ZPBP2Q6X784 338 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 CEP120Q8N960 986 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 ZNF558Q96NG5 402 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 RPS6KC1Q96S38 1066 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 C11orf84Q9BUA3 381 aaPredicted RBP21.08■□□□□ 0.97
COPS7A-205ENST00000536872 PLVAPQ9BX97 442 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 FGFBP2Q9BYJ0 223 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 IKZF4Q9H2S9 585 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 NRDE2Q9H7Z3 1164 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 KANSL3Q9P2N6 904 aa21.08■□□□□ 0.97
COPS7A-205ENST00000536872 DDHD2O94830 711 aa21.07■□□□□ 0.96
COPS7A-205ENST00000536872 PRPF6O94906 941 aaKnown RBP21.07■□□□□ 0.96
COPS7A-205ENST00000536872 ITGB1P05556 798 aa21.07■□□□□ 0.96
COPS7A-205ENST00000536872 MCF2P10911 925 aa21.07■□□□□ 0.96
COPS7A-205ENST00000536872 CASP5P51878 434 aa21.07■□□□□ 0.96
COPS7A-205ENST00000536872 BCAR1P56945 870 aa21.07■□□□□ 0.96
COPS7A-205ENST00000536872 KCNA1Q09470 495 aa21.07■□□□□ 0.96
COPS7A-205ENST00000536872 KRBA2Q6ZNG9 492 aa21.07■□□□□ 0.96
COPS7A-205ENST00000536872 SYCP3Q8IZU3 236 aa21.07■□□□□ 0.96
COPS7A-205ENST00000536872 ACCSQ96QU6 501 aa21.07■□□□□ 0.96
COPS7A-205ENST00000536872 CCDC94Q9BW85 323 aaPredicted RBP21.07■□□□□ 0.96
COPS7A-205ENST00000536872 PLAGL2Q9UPG8 496 aa21.07■□□□□ 0.96
COPS7A-205ENST00000536872 STXBP5LQ9Y2K9 1186 aa21.07■□□□□ 0.96
COPS7A-205ENST00000536872 PCDHB13Q9Y5F0 798 aa21.07■□□□□ 0.96
COPS7A-205ENST00000536872 TISP43B9A030 160 aa21.06■□□□□ 0.96
COPS7A-205ENST00000536872 ANKRD63C9JTQ0 380 aa21.06■□□□□ 0.96
COPS7A-205ENST00000536872 C5orf67F2Z3F1 127 aa21.06■□□□□ 0.96
COPS7A-205ENST00000536872 TULP1O00294 542 aaPredicted RBP21.06■□□□□ 0.96
COPS7A-205ENST00000536872 ABLIM1O14639 778 aa21.06■□□□□ 0.96
COPS7A-205ENST00000536872 GADD45BO75293 160 aaPredicted RBP21.06■□□□□ 0.96
COPS7A-205ENST00000536872 SCP2P22307 547 aa21.06■□□□□ 0.96
COPS7A-205ENST00000536872 PROZP22891 400 aa21.06■□□□□ 0.96
COPS7A-205ENST00000536872 ABCD1P33897 745 aa21.06■□□□□ 0.96
COPS7A-205ENST00000536872 ALDH7A1P49419 539 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms