RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ZNF677Q86XU0 584 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 RASGEF1CQ8N431 466 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 OTUD5Q96G74 571 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 FNBP1Q96RU3 617 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 ELP3Q9H9T3 547 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 TMEM59LQ9UK28 342 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 PNMA3Q9UL41 463 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 STXBP5LQ9Y2K9 1186 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 SOWAHBA6NEL2 793 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 TULP1O00294 542 aaPredicted RBP14.64□□□□□ -0.07
SMG6-203ENST00000536871 MAFO75444 373 aaPredicted RBP14.64□□□□□ -0.07
SMG6-203ENST00000536871 PDE6CP51160 858 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 GPC5P78333 572 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 MAP2K1Q02750 393 aaPredicted RBP14.64□□□□□ -0.07
SMG6-203ENST00000536871 WDR44Q5JSH3 913 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 IER5Q5VY09 327 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 SLC39A4Q6P5W5 647 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 ZPBP2Q6X784 338 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 PLPPR4Q7Z2D5 763 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 TRMT1LQ7Z2T5 733 aaKnown RBP14.64□□□□□ -0.07
SMG6-203ENST00000536871 ARHGEF19Q8IW93 802 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 PPM1KQ8N3J5 372 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 GOLGA6L1Q8N7Z2 621 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 SLC35G2Q8TBE7 412 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 FAM71BQ8TC56 605 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 PLEKHO2Q8TD55 490 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 PSPC1Q8WXF1 523 aaKnown RBP14.64□□□□□ -0.07
SMG6-203ENST00000536871 CCDC127Q96BQ5 260 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 SAAL1Q96ER3 474 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 CDCA5Q96FF9 252 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 HES6Q96HZ4 224 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.64□□□□□ -0.078e-7■■■■■ 32.7
SMG6-203ENST00000536871 LRRC1Q9BTT6 524 aa14.64□□□□□ -0.07
SMG6-203ENST00000536871 FHDC1Q9C0D6 1143 aaPredicted RBP14.64□□□□□ -0.07
SMG6-203ENST00000536871 GSTTP1A0A1W2PQM5 241 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 GOLGA8IPA6NC78 632 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 GOLGA8JA6NMD2 632 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 TMCO5BA8MYB1 307 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 LRRN2O75325 713 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 MTA2O94776 668 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 OAS2P29728 719 aaKnown RBP14.63□□□□□ -0.07
SMG6-203ENST00000536871 AARSP49588 968 aaKnown RBP eCLIP14.63□□□□□ -0.07
SMG6-203ENST00000536871 MXD4Q14582 209 aaPredicted RBP14.63□□□□□ -0.07
SMG6-203ENST00000536871 C15orf39Q6ZRI6 1047 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 NT5DC3Q86UY8 548 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 OLIG1Q8TAK6 271 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 KIFC3Q9BVG8 833 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 C2orf40Q9H1Z8 148 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 CARD9Q9H257 536 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 C1orf112Q9NSG2 853 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 RBM12Q9NTZ6 932 aaKnown RBP14.63□□□□□ -0.07
SMG6-203ENST00000536871 SEPT11Q9NVA2 429 aaKnown RBP14.63□□□□□ -0.07
SMG6-203ENST00000536871 AGO2Q9UKV8 859 aaKnown RBP14.63□□□□□ -0.07
SMG6-203ENST00000536871 ARID2Q68CP9 1835 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 ADGRA3Q8IWK6 1321 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 SBF1O95248 1867 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 ASB14A6NK59 587 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 LGR5O75473 907 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 HSPA6P17066 643 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 ATP4AP20648 1035 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 GLRA2P23416 452 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 PAK2Q13177 524 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 GRM1Q13255 1194 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 TTLL12Q14166 644 aaPredicted RBP14.63□□□□□ -0.07
SMG6-203ENST00000536871 SURF1Q15526 300 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 SV2AQ7L0J3 742 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 HELQQ8TDG4 1101 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 EPS8L1Q8TE68 723 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 AENQ8WTP8 325 aaKnown RBP14.63□□□□□ -0.07
SMG6-203ENST00000536871 SCFD2Q8WU76 684 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 CAVIN3Q969G5 261 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 TRIM11Q96F44 468 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 RPS6KC1Q96S38 1066 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 CEP89Q96ST8 783 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 PSMB7Q99436 277 aa14.63□□□□□ -0.07
SMG6-203ENST00000536871 DNAJC25-GNG10A0A024R161 153 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 LRRIQ4A6NIV6 560 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 ADCY3O60266 1144 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 CNMDO75829 334 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 GGPS1O95749 300 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 TNNT3P45378 269 aaPredicted RBP14.62□□□□□ -0.07
SMG6-203ENST00000536871 CCNA1P78396 465 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 CDR2Q01850 454 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 PRPF4BQ13523 1007 aaKnown RBP14.62□□□□□ -0.07
SMG6-203ENST00000536871 C9orf131Q5VYM1 1079 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 TAS1R3Q7RTX0 852 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 RPUSD2Q8IZ73 545 aaKnown RBP14.62□□□□□ -0.07
SMG6-203ENST00000536871 UBL4BQ8N7F7 174 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 MMP19Q99542 508 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 FAM213AQ9BRX8 229 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 PAGR1Q9BTK6 254 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 SLITRK6Q9H5Y7 841 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 GDF3Q9NR23 364 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
SMG6-203ENST00000536871 UVRAGQ9P2Y5 699 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 NOCTQ9UK39 431 aaKnown RBP14.62□□□□□ -0.07
SMG6-203ENST00000536871 PTPRFP10586 1907 aa14.62□□□□□ -0.07
SMG6-203ENST00000536871 IQCA1LA6NCM1 817 aa14.61□□□□□ -0.07
SMG6-203ENST00000536871 NOP56O00567 594 aaKnown RBP14.61□□□□□ -0.07
SMG6-203ENST00000536871 CEP104O60308 925 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms