RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 ADAM17P78536 824 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 ITGB3BPQ13352 177 aaPredicted RBP7.99□□□□□ -1.13
YBX3-206ENST00000536823 ZNF211Q13398 564 aaPredicted RBP7.99□□□□□ -1.13
YBX3-206ENST00000536823 GPNMBQ14956 572 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 ZNF648Q5T619 568 aaPredicted RBP7.99□□□□□ -1.13
YBX3-206ENST00000536823 JAKMIP3Q5VZ66 844 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 CYP2W1Q8TAV3 490 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 BICD2Q8TD16 824 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 CRYGNQ8WXF5 182 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 ATP6V0A1Q93050 837 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 IL17RAQ96F46 866 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 CDX2Q99626 313 aaPredicted RBP7.99□□□□□ -1.13
YBX3-206ENST00000536823 FTOQ9C0B1 505 aaKnown RBP eCLIP7.99□□□□□ -1.13
YBX3-206ENST00000536823 C6orf50Q9HD87 102 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 SLC9A2Q9UBY0 812 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 MSRAQ9UJ68 235 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 USP20Q9Y2K6 914 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 MICAL3Q7RTP6 2002 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 PRRC2BQ5JSZ5 2229 aaKnown RBP7.98□□□□□ -1.13
YBX3-206ENST00000536823 IGLV3-22A0A075B6J6 115 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 DBX1A6NMT0 343 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 TNFRSF10BO14763 440 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 CPLX1O14810 134 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 TREHO43280 583 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 EIF5BO60841 1220 aaKnown RBP7.98□□□□□ -1.13
YBX3-206ENST00000536823 NBNO60934 754 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 DEXIO95424 95 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 CYP3A4P08684 503 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 ARP10275 920 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 THPOP40225 353 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 SSRP1Q08945 709 aaKnown RBP7.98□□□□□ -1.13
YBX3-206ENST00000536823 PPFIA1Q13136 1202 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 ZNF618Q5T7W0 954 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 CNKSR3Q6P9H4 555 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 CPLX2Q6PUV4 134 aaKnown RBP7.98□□□□□ -1.13
YBX3-206ENST00000536823 PLA2G4DQ86XP0 818 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 GLYCTKQ8IVS8 523 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 FAM177A1Q8N128 213 aaPredicted RBP7.98□□□□□ -1.13
YBX3-206ENST00000536823 RASGRP4Q8TDF6 673 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 LMBR1Q8WVP7 490 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 MYLIPQ8WY64 445 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 SLC9A7Q96T83 725 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 PCYT2Q99447 389 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 SDF4Q9BRK5 362 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 RNPEPQ9H4A4 650 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 SMARCAD1Q9H4L7 1026 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 ZNF576Q9H609 170 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 AGO4Q9HCK5 861 aaKnown RBP7.98□□□□□ -1.13
YBX3-206ENST00000536823 SH3GLB2Q9NR46 395 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 SETD4Q9NVD3 440 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 ERAP1Q9NZ08 941 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 VPS54Q9P1Q0 977 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 LRFN2Q9ULH4 789 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 HIF3AQ9Y2N7 669 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 YBX2Q9Y2T7 364 aaKnown RBP7.98□□□□□ -1.13
YBX3-206ENST00000536823 PCDHA11Q9Y5I1 949 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 NRCAMQ92823 1304 aa7.98□□□□□ -1.13
YBX3-206ENST00000536823 PTPRSQ13332 1948 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 MBLAC1A4D2B0 266 aaPredicted RBP7.97□□□□□ -1.13
YBX3-206ENST00000536823 RSPH10B2B2RC85 870 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 FAM86B1E9PN63 330 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 EFCAB14O75071 495 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 CDKL5O76039 1030 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 PRNPP04156 253 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 FAM86B2P0C5J1 330 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 RSPH10BP0C881 870 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 FOSL1P15407 271 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 MARK3P27448 753 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 CIITAP33076 1130 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 ZNF76P36508 570 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 KCNJ6P48051 423 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 PREPP48147 710 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 RABGGTBP53611 331 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 NLRP5P59047 1200 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 ACTR2P61160 394 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 WDR5P61964 334 aaKnown RBP7.97□□□□□ -1.13
YBX3-206ENST00000536823 SETQ01105 290 aaPredicted RBP7.97□□□□□ -1.13
YBX3-206ENST00000536823 STK3Q13188 491 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 ZNF124Q15973 351 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 TCTN1Q2MV58 587 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 PHOSPHO2Q8TCD6 241 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 UBASH3BQ8TF42 649 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 GLG1Q92896 1179 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 LACRTQ9GZZ8 138 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 NKX2-4Q9H2Z4 354 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 AZI2Q9H6S1 392 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 REV3LO60673 3130 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 STK36Q9NRP7 1315 aa7.97□□□□□ -1.13
YBX3-206ENST00000536823 MYH9P35579 1960 aaKnown RBP7.97□□□□□ -1.13
YBX3-206ENST00000536823 VCANP13611 3396 aa7.96□□□□□ -1.13
YBX3-206ENST00000536823 ABHD14A-ACY1A0A1B0GW23 586 aa7.96□□□□□ -1.14
YBX3-206ENST00000536823 IPO5O00410 1097 aaKnown RBP7.96□□□□□ -1.14
YBX3-206ENST00000536823 TM4SF5O14894 197 aa7.96□□□□□ -1.14
YBX3-206ENST00000536823 PFKFB2O60825 505 aa7.96□□□□□ -1.14
YBX3-206ENST00000536823 FAM13AO94988 1023 aa7.96□□□□□ -1.14
YBX3-206ENST00000536823 CCNE2O96020 404 aa7.96□□□□□ -1.14
YBX3-206ENST00000536823 CTSHP09668 335 aa7.96□□□□□ -1.14
YBX3-206ENST00000536823 MYOGP15173 224 aa7.96□□□□□ -1.14
YBX3-206ENST00000536823 FOSL2P15408 326 aa7.96□□□□□ -1.14
YBX3-206ENST00000536823 CDC25BP30305 580 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms