RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 RAC3P60763 192 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 PHC1P78364 1004 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 OCRLQ01968 901 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 ADAM15Q13444 863 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 DGKDQ16760 1214 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 GPR158Q5T848 1215 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 EGFLAMQ63HQ2 1017 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 KIAA1841Q6NSI8 718 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 TIGD7Q6NT04 549 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-207ENST00000536634 PTF1AQ7RTS3 328 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 OR14K1Q8NGZ2 314 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 SAMD11Q96NU1 681 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 KRTAP9-8Q9BYQ0 159 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 MTG2Q9H4K7 406 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 SMPD4Q9NXE4 827 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 KCMF1Q9P0J7 381 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 SAE1Q9UBE0 346 aaPredicted RBP7.41□□□□□ -1.22
CLIP1-207ENST00000536634 MSRAQ9UJ68 235 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 OAZ3Q9UMX2 235 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 GPRASP1Q5JY77 1395 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 DLC1Q96QB1 1528 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 TULP4Q9NRJ4 1543 aa7.41□□□□□ -1.22
CLIP1-207ENST00000536634 BCAR1P56945 870 aa7.4□□□□□ -1.22
CLIP1-207ENST00000536634 HGFACQ04756 655 aa7.4□□□□□ -1.22
CLIP1-207ENST00000536634 STRN3Q13033 797 aa7.4□□□□□ -1.22
CLIP1-207ENST00000536634 ZBTB41Q5SVQ8 909 aa7.4□□□□□ -1.22
CLIP1-207ENST00000536634 DDX46Q7L014 1031 aaKnown RBP7.4□□□□□ -1.22
CLIP1-207ENST00000536634 TAX1BP1Q86VP1 789 aa7.4□□□□□ -1.22
CLIP1-207ENST00000536634 ZNF610Q8N9Z0 462 aa7.4□□□□□ -1.22
CLIP1-207ENST00000536634 RPGRQ92834 1020 aaKnown RBP7.4□□□□□ -1.22
CLIP1-207ENST00000536634 USP7Q93009 1102 aa7.4□□□□□ -1.22
CLIP1-207ENST00000536634 C8orf49Q96NF6 230 aa7.4□□□□□ -1.22
CLIP1-207ENST00000536634 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
CLIP1-207ENST00000536634 PITHD1Q9GZP4 211 aaPredicted RBP7.4□□□□□ -1.22
CLIP1-207ENST00000536634 CAAP1Q9H8G2 361 aa7.4□□□□□ -1.22
CLIP1-207ENST00000536634 C14orf93Q9H972 538 aaKnown RBP7.4□□□□□ -1.22
CLIP1-207ENST00000536634 DENND2AQ9ULE3 1009 aa7.4□□□□□ -1.22
CLIP1-207ENST00000536634 LRRC37A3O60309 1634 aa7.4□□□□□ -1.22
CLIP1-207ENST00000536634 ADGRB1O14514 1584 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 DHX57Q6P158 1386 aaKnown RBP7.39□□□□□ -1.23
CLIP1-207ENST00000536634 FOXS1O43638 330 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 LSP1P33241 339 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 MAGEA10P43363 369 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-207ENST00000536634 NFKB2Q00653 900 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 DDB1Q16531 1140 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 SPATS1Q496A3 300 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 ATP13A4Q4VNC1 1196 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 BROXQ5VW32 411 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 TCTN3Q6NUS6 607 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 BMP8AQ7Z5Y6 402 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 C11orf74Q86VG3 221 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 DNERQ8NFT8 737 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 CHAC2Q8WUX2 184 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 NKD2Q969F2 451 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-207ENST00000536634 DYDC2Q96IM9 177 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 SYT17Q9BSW7 474 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 HAPLN2Q9GZV7 340 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 CD248Q9HCU0 757 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 POLR3BQ9NW08 1133 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-207ENST00000536634 DNAI1Q9UI46 699 aa7.39□□□□□ -1.23
CLIP1-207ENST00000536634 CTDP1Q9Y5B0 961 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-207ENST00000536634 SHANK3Q9BYB0 1731 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 ATP7BP35670 1465 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 OVOS2A0A0G2JMS6 1433 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 OVOS2A0A0J9YW53 1432 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 OVOS2Q6IE36 1432 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 A0A0A6YYJ9 748 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 PATE3B3GLJ2 98 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 OPHN1O60890 802 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 SOX5P35711 763 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 DUSP8Q13202 625 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 ACAP1Q15027 740 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 KLHDC10Q6PID8 442 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 TCP11L2Q8N4U5 519 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 AFAP1L2Q8N4X5 818 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 TTC9BQ8N6N2 239 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 NGDNQ8NEJ9 315 aaKnown RBP7.38□□□□□ -1.23
CLIP1-207ENST00000536634 SLC5A5Q92911 643 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 WWC2-AS2Q96NR7 200 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 POGKQ9P215 609 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 USP36Q9P275 1121 aaKnown RBP7.38□□□□□ -1.23
CLIP1-207ENST00000536634 PUF60Q9UHX1 559 aaKnown RBP7.38□□□□□ -1.23
CLIP1-207ENST00000536634 VWA7Q9Y334 891 aa7.38□□□□□ -1.23
CLIP1-207ENST00000536634 COL5A2P05997 1499 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-207ENST00000536634 WNK3Q9BYP7 1800 aa7.37□□□□□ -1.23
CLIP1-207ENST00000536634 A0A0A6YYK5 440 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-207ENST00000536634 PLSCR1O15162 318 aa7.37□□□□□ -1.23
CLIP1-207ENST00000536634 CDC14BO60729 498 aa7.37□□□□□ -1.23
CLIP1-207ENST00000536634 CLSTN1O94985 981 aa7.37□□□□□ -1.23
CLIP1-207ENST00000536634 PCDH8O95206 1070 aa7.37□□□□□ -1.23
CLIP1-207ENST00000536634 CR2P20023 1033 aa7.37□□□□□ -1.23
CLIP1-207ENST00000536634 EVA1CP58658 441 aa7.37□□□□□ -1.23
CLIP1-207ENST00000536634 ADAM17P78536 824 aa7.37□□□□□ -1.23
CLIP1-207ENST00000536634 ESPNLQ6ZVH7 1005 aa7.37□□□□□ -1.23
CLIP1-207ENST00000536634 CXorf67Q86X51 503 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-207ENST00000536634 GIMAP8Q8ND71 665 aaPredicted RBP7.37□□□□□ -1.23
CLIP1-207ENST00000536634 TTC1Q99614 292 aa7.37□□□□□ -1.23
CLIP1-207ENST00000536634 SOX7Q9BT81 388 aa7.37□□□□□ -1.23
CLIP1-207ENST00000536634 C12orf65Q9H3J6 166 aaKnown RBP7.37□□□□□ -1.23
CLIP1-207ENST00000536634 IFT22Q9H7X7 185 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms