RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 RNF10Q8N5U6 811 aaKnown RBP15□□□□□ -0.01
LIG1-203ENST00000536218 KIFAP3Q92845 792 aa15□□□□□ -0.01
LIG1-203ENST00000536218 ERGIC2Q96RQ1 377 aa15□□□□□ -0.01
LIG1-203ENST00000536218 DDX47Q9H0S4 455 aaKnown RBP15□□□□□ -0.01
LIG1-203ENST00000536218 VCXQ9H320 206 aa15□□□□□ -0.01
LIG1-203ENST00000536218 RAVER2Q9HCJ3 691 aaKnown RBP15□□□□□ -0.01
LIG1-203ENST00000536218 RNF14Q9UBS8 474 aa15□□□□□ -0.01
LIG1-203ENST00000536218 RABGAP1Q9Y3P9 1069 aa15□□□□□ -0.01
LIG1-203ENST00000536218 COL4A3BPQ9Y5P4 624 aa15□□□□□ -0.01
LIG1-203ENST00000536218 NFIBO00712 420 aa15□□□□□ -0.01
LIG1-203ENST00000536218 CEP104O60308 925 aa15□□□□□ -0.01
LIG1-203ENST00000536218 ATP6V1G1O75348 118 aa15□□□□□ -0.01
LIG1-203ENST00000536218 ECHS1P30084 290 aa15□□□□□ -0.01
LIG1-203ENST00000536218 IKZF4Q9H2S9 585 aa15□□□□□ -0.01
LIG1-203ENST00000536218 TSKSQ9UJT2 592 aa15□□□□□ -0.01
LIG1-203ENST00000536218 ASB3Q9Y575 518 aa15□□□□□ -0.01
LIG1-203ENST00000536218 PCDHGA4Q9Y5G9 962 aa15□□□□□ -0.01
LIG1-203ENST00000536218 PIK3CDO00329 1044 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 MYBP10242 640 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 CUL1Q13616 776 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 SYT2Q8N9I0 419 aaPredicted RBP14.99□□□□□ -0.01
LIG1-203ENST00000536218 ZNF577Q9BSK1 485 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 FEM1BQ9UK73 627 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 PCDHA2Q9Y5H9 948 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 TBC1D12O60347 775 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 GMPSP49915 693 aaPredicted RBP14.99□□□□□ -0.01
LIG1-203ENST00000536218 KCNA1Q09470 495 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 DYNC1I2Q13409 638 aaKnown RBP14.99□□□□□ -0.01
LIG1-203ENST00000536218 LRRC14Q15048 493 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 MUM1Q2TAK8 710 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 CEP55Q53EZ4 464 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 FKBP1CQ5VVH2 108 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 OTOP1Q7RTM1 612 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 RBM12BQ8IXT5 1001 aaKnown RBP14.99□□□□□ -0.01
LIG1-203ENST00000536218 UCMAQ8WVF2 138 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 ARFGEF1Q9Y6D6 1849 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 hCG_2014768A0A024R1R8 64 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 TBCAO75347 108 aaKnown RBP14.99□□□□□ -0.01
LIG1-203ENST00000536218 FLOT1O75955 427 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 GCNT3O95395 438 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 ARID5AQ03989 594 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 TNIP1Q15025 636 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 NBPF12Q5TAG4 269 aaPredicted RBP14.99□□□□□ -0.01
LIG1-203ENST00000536218 FAM47EQ6ZV65 393 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 FAM160B2Q86V87 743 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 USP38Q8NB14 1042 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 ETNK1Q9HBU6 452 aa14.99□□□□□ -0.01
LIG1-203ENST00000536218 ZNF646O15015 1829 aaPredicted RBP14.98□□□□□ -0.01
LIG1-203ENST00000536218 CLIC2O15247 247 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 CYP3A4P08684 503 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 NR2F2P24468 414 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 TSNAXIP1Q2TAA8 658 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 ZCWPW2Q504Y3 356 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 KSR1Q8IVT5 923 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 MTMR14Q8NCE2 650 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 PHC3Q8NDX5 983 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 LBHD1Q9BQE6 289 aaPredicted RBP14.98□□□□□ -0.01
LIG1-203ENST00000536218 SH2D3AQ9BRG2 576 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 GOLPH3Q9H4A6 298 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 FGFR1OP2Q9NVK5 253 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 CNOT7Q9UIV1 285 aaKnown RBP14.98□□□□□ -0.01
LIG1-203ENST00000536218 SIK3Q9Y2K2 1263 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 CTDP1Q9Y5B0 961 aaPredicted RBP14.98□□□□□ -0.01
LIG1-203ENST00000536218 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.98□□□□□ -0.01
LIG1-203ENST00000536218 LRRC53A6NM62 1247 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 F8VZ95 297 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 SLITRK3O94933 977 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 ATP6V1C1P21283 382 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 EPS15P42566 896 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 MAGEA10P43363 369 aaPredicted RBP14.98□□□□□ -0.01
LIG1-203ENST00000536218 SLCO1A2P46721 670 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 ZNF131P52739 623 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 TGFB2P61812 414 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 PREBQ9HCU5 417 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 GALNT8Q9NY28 637 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 PGAP2Q9UHJ9 254 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 AMACRQ9UHK6 382 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 PLAGL2Q9UPG8 496 aa14.98□□□□□ -0.01
LIG1-203ENST00000536218 IFI35P80217 286 aaPredicted RBP14.97□□□□□ -0.01
LIG1-203ENST00000536218 MTMR2Q13614 643 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 PRKG1Q13976 671 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 PLS1Q14651 629 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 R3HDM1Q15032 1099 aaKnown RBP14.97□□□□□ -0.01
LIG1-203ENST00000536218 TRIM42Q8IWZ5 723 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 MYCT1Q8N699 235 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 ATXN2LQ8WWM7 1075 aaKnown RBP14.97□□□□□ -0.01
LIG1-203ENST00000536218 BICD1Q96G01 975 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 DEFB129Q9H1M3 183 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 AZI2Q9H6S1 392 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 MLXIPLQ9NP71 852 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 RHBDL2Q9NX52 303 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 COL20A1Q9P218 1284 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 HACL1Q9UJ83 578 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 USP15Q9Y4E8 981 aaPredicted RBP14.97□□□□□ -0.01
LIG1-203ENST00000536218 LRRC42Q9Y546 428 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 SNX3O60493 162 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 SPP2Q13103 211 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 LBRQ14739 615 aaKnown RBP14.97□□□□□ -0.01
LIG1-203ENST00000536218 TCERG1LQ5VWI1 586 aa14.97□□□□□ -0.01
LIG1-203ENST00000536218 TMC3Q7Z5M5 1100 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms