RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 URGCPQ8TCY9 931 aa18.07■□□□□ 0.48
ATL3-202ENST00000535789 KHSRPQ92945 711 aaKnown RBP eCLIP18.07■□□□□ 0.48
ATL3-202ENST00000535789 EPSTI1Q96J88 318 aa18.07■□□□□ 0.48
ATL3-202ENST00000535789 NT5C3AQ9H0P0 336 aa18.07■□□□□ 0.48
ATL3-202ENST00000535789 KLK14Q9P0G3 267 aa18.07■□□□□ 0.48
ATL3-202ENST00000535789 C2orf71A6NGG8 1288 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 TNFRSF10AO00220 468 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 PTGESO14684 152 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 N4BP3O15049 544 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 MBTPS2O43462 519 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 BMP15O95972 392 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 HSP90AA1P07900 732 aaKnown RBP18.06■□□□□ 0.48
ATL3-202ENST00000535789 LONP1P36776 959 aaKnown RBP18.06■□□□□ 0.48
ATL3-202ENST00000535789 ALDH7A1P49419 539 aaKnown RBP18.06■□□□□ 0.48
ATL3-202ENST00000535789 MICAL1Q8TDZ2 1067 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 TMEM169Q96HH4 297 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 IFT74Q96LB3 600 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 CLIC6Q96NY7 704 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 TRIM6Q9C030 488 aaPredicted RBP18.06■□□□□ 0.48
ATL3-202ENST00000535789 TLE6Q9H808 572 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 SNTG2Q9NY99 539 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 GIT1Q9Y2X7 761 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 DOCK6Q96HP0 2047 aa18.06■□□□□ 0.48
ATL3-202ENST00000535789 NRP1O14786 923 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 SLC16A4O15374 487 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 RECQL4O94761 1208 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 SSBP05455 408 aaKnown RBP eCLIP18.05■□□□□ 0.48
ATL3-202ENST00000535789 DDIT3P35638 169 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 CEBPZQ03701 1054 aaKnown RBP18.05■□□□□ 0.48
ATL3-202ENST00000535789 PKP1Q13835 747 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 NAB2Q15742 525 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 DDX53Q86TM3 631 aaKnown RBP18.05■□□□□ 0.48
ATL3-202ENST00000535789 FAM178BQ8IXR5 827 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 RNF168Q8IYW5 571 aaPredicted RBP18.05■□□□□ 0.48
ATL3-202ENST00000535789 VPS52Q8N1B4 723 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 CEP120Q8N960 986 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 FEZF2Q8TBJ5 459 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 DRC1Q96MC2 740 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 REEP2Q9BRK0 252 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 PAAF1Q9BRP4 392 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 TMEM175Q9BSA9 504 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 PTPRHQ9HD43 1115 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 UBN1Q9NPG3 1134 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 PRG3Q9Y2Y8 225 aaPredicted RBP18.05■□□□□ 0.48
ATL3-202ENST00000535789 TSC2P49815 1807 aa18.05■□□□□ 0.48
ATL3-202ENST00000535789 CCDC169A6NNP5 214 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 MEFVO15553 781 aaPredicted RBP18.04■□□□□ 0.48
ATL3-202ENST00000535789 SLC26A4O43511 780 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 NCK2O43639 380 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 NDUFV1P49821 464 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 EFNA5P52803 228 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 KRT17Q04695 432 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 DMP1Q13316 513 aaPredicted RBP18.04■□□□□ 0.48
ATL3-202ENST00000535789 MCM6Q14566 821 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 SMC1AQ14683 1233 aaKnown RBP18.04■□□□□ 0.48
ATL3-202ENST00000535789 PTPN14Q15678 1187 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 ATF7IP2Q5U623 682 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 PDE12Q6L8Q7 609 aaKnown RBP18.04■□□□□ 0.48
ATL3-202ENST00000535789 TMC7Q7Z402 723 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 SMRP1Q8NCR6 262 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 RAD54LQ92698 747 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 CDK5RAP3Q96JB5 506 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 CCSER1Q9C0I3 900 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 CDT1Q9H211 546 aa18.04■□□□□ 0.48
ATL3-202ENST00000535789 NGRNQ9NPE2 291 aaKnown RBP18.04■□□□□ 0.48
ATL3-202ENST00000535789 A0A087X0B3 334 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 CTSAP10619 480 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 PLS3P13797 630 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 PROZP22891 400 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 UBA7P41226 1012 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 NCBP1Q09161 790 aaKnown RBP18.03■□□□□ 0.48
ATL3-202ENST00000535789 COASYQ13057 564 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 SMAD4Q13485 552 aaKnown RBP18.03■□□□□ 0.48
ATL3-202ENST00000535789 SMAD2Q15796 467 aaKnown RBP18.03■□□□□ 0.48
ATL3-202ENST00000535789 TAS1R1Q7RTX1 841 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 GPBP1Q86WP2 473 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 KCTD17Q8N5Z5 321 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 MRPL43Q8N983 215 aaKnown RBP18.03■□□□□ 0.48
ATL3-202ENST00000535789 TMEM161BQ8NDZ6 487 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 RABGGTAQ92696 567 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 PPP2R3CQ969Q6 453 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 FIZ1Q96SL8 496 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 ACO2Q99798 780 aaKnown RBP18.03■□□□□ 0.48
ATL3-202ENST00000535789 TIPINQ9BVW5 301 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 TMEM134Q9H6X4 195 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 KMT5AQ9NQR1 393 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 KANSL3Q9P2N6 904 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 PARP2Q9UGN5 583 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 PUF60Q9UHX1 559 aaKnown RBP18.03■□□□□ 0.48
ATL3-202ENST00000535789 CD207Q9UJ71 328 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 CDH22Q9UJ99 828 aa18.03■□□□□ 0.48
ATL3-202ENST00000535789 SRPRBQ9Y5M8 271 aaKnown RBP18.03■□□□□ 0.48
ATL3-202ENST00000535789 MORC2Q9Y6X9 1032 aaPredicted RBP18.03■□□□□ 0.48
ATL3-202ENST00000535789 K7ERI5 159 aa18.02■□□□□ 0.48
ATL3-202ENST00000535789 LILRB3O75022 631 aa18.02■□□□□ 0.48
ATL3-202ENST00000535789 CLASP2O75122 1294 aaKnown RBP18.02■□□□□ 0.48
ATL3-202ENST00000535789 MAPTP10636 758 aaKnown RBP18.02■□□□□ 0.48
ATL3-202ENST00000535789 IGFBP6P24592 240 aaPredicted RBP18.02■□□□□ 0.48
ATL3-202ENST00000535789 NASPP49321 788 aaPredicted RBP18.02■□□□□ 0.48
ATL3-202ENST00000535789 ZNF131P52739 623 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms