RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 KIAA1841Q6NSI8 718 aa13.09□□□□□ -0.31
KNTC1-208ENST00000535410 LLGL2Q6P1M3 1020 aa13.09□□□□□ -0.31
KNTC1-208ENST00000535410 COLGALT2Q8IYK4 626 aa13.09□□□□□ -0.31
KNTC1-208ENST00000535410 GPR65Q8IYL9 337 aa13.09□□□□□ -0.31
KNTC1-208ENST00000535410 CALML4Q96GE6 196 aa13.09□□□□□ -0.31
KNTC1-208ENST00000535410 RIPOR3Q96MK2 946 aa13.09□□□□□ -0.31
KNTC1-208ENST00000535410 EPHX3Q9H6B9 360 aa13.09□□□□□ -0.31
KNTC1-208ENST00000535410 CD320Q9NPF0 282 aa13.09□□□□□ -0.31
KNTC1-208ENST00000535410 HES2Q9Y543 173 aa13.09□□□□□ -0.31
KNTC1-208ENST00000535410 HCFC2Q9Y5Z7 792 aa13.09□□□□□ -0.31
KNTC1-208ENST00000535410 VWA3AA6NCI4 1184 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 CD2BP2O95400 341 aaKnown RBP13.08□□□□□ -0.32
KNTC1-208ENST00000535410 C1RP00736 705 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 SOD2P04179 222 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 SCP2P22307 547 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 KLRC2P26717 231 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 UBA7P41226 1012 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 MTHFRP42898 656 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 SCNN1GP51170 649 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 CREMQ03060 361 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 DSC1Q08554 894 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 CUL4AQ13619 759 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 CBX2Q14781 532 aaPredicted RBP13.08□□□□□ -0.32
KNTC1-208ENST00000535410 ECM1Q16610 540 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 ATAT1Q5SQI0 421 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 HYIQ5T013 277 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 ADAM7Q9H2U9 754 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 NXF3Q9H4D5 531 aaKnown RBP13.08□□□□□ -0.32
KNTC1-208ENST00000535410 TMEM134Q9H6X4 195 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 KMT5AQ9NQR1 393 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 NR2E1Q9Y466 385 aa13.08□□□□□ -0.32
KNTC1-208ENST00000535410 E9PMD0 336 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 TADA2AO75478 443 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 SSBP05455 408 aaKnown RBP eCLIP13.07□□□□□ -0.32
KNTC1-208ENST00000535410 THP07101 528 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 ADH1AP07327 375 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 AKAP5P24588 427 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 GUCY2CP25092 1073 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 LONP1P36776 959 aaKnown RBP13.07□□□□□ -0.32
KNTC1-208ENST00000535410 YARSP54577 528 aaKnown RBP13.07□□□□□ -0.32
KNTC1-208ENST00000535410 PEX3P56589 373 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 STRN3Q13033 797 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 ATF7IP2Q5U623 682 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 RINT1Q6NUQ1 792 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 CABP7Q86V35 215 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 SYT2Q8N9I0 419 aaPredicted RBP13.07□□□□□ -0.32
KNTC1-208ENST00000535410 VN1R2Q8NFZ6 395 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 RASSF8Q8NHQ8 419 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 BSNDQ8WZ55 320 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 SUSD6Q92537 303 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 INTS4Q96HW7 963 aaKnown RBP13.07□□□□□ -0.32
KNTC1-208ENST00000535410 ZFP42Q96MM3 310 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 CCDC94Q9BW85 323 aaPredicted RBP13.07□□□□□ -0.32
KNTC1-208ENST00000535410 MRPL4Q9BYD3 311 aaKnown RBP13.07□□□□□ -0.32
KNTC1-208ENST00000535410 BACH2Q9BYV9 841 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 CCDC113Q9H0I3 377 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 S1PR5Q9H228 398 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 PDZD7Q9H5P4 517 aa13.07□□□□□ -0.32
KNTC1-208ENST00000535410 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.07□□□□□ -0.32
KNTC1-208ENST00000535410 TOPORSQ9NS56 1045 aaPredicted RBP13.07□□□□□ -0.32
KNTC1-208ENST00000535410 LARSQ9P2J5 1176 aaKnown RBP13.07□□□□□ -0.32
KNTC1-208ENST00000535410 PRG3Q9Y2Y8 225 aaPredicted RBP13.07□□□□□ -0.32
KNTC1-208ENST00000535410 KIAA1671Q9BY89 1806 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 VPS37CA5D8V6 355 aaPredicted RBP13.06□□□□□ -0.32
KNTC1-208ENST00000535410 PP2D1A8MPX8 630 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 LOC730098B7Z3J9 87 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 HIP1RO75146 1068 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 PDIA4P13667 645 aaKnown RBP13.06□□□□□ -0.32
KNTC1-208ENST00000535410 COL9A1P20849 921 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 CDC25AP30304 524 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 ABCD1P33897 745 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 NPTX2P47972 431 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 GLUD2P49448 558 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 AFF1P51825 1210 aaKnown RBP13.06□□□□□ -0.32
KNTC1-208ENST00000535410 ELAVL2Q12926 359 aaKnown RBP13.06□□□□□ -0.32
KNTC1-208ENST00000535410 TUSC3Q13454 348 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 PTPN14Q15678 1187 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 IL17AQ16552 155 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 USP41Q3LFD5 358 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 PDXDC1Q6P996 788 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 SYCE2Q6PIF2 218 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 C1orf186Q6ZWK4 172 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 TMEM173Q86WV6 379 aaPredicted RBP13.06□□□□□ -0.32
KNTC1-208ENST00000535410 CDR2LQ86X02 465 aaPredicted RBP13.06□□□□□ -0.32
KNTC1-208ENST00000535410 RNF135Q8IUD6 432 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 SPIRE2Q8WWL2 714 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 RPGRIP1Q96KN7 1286 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 KLHL5Q96PQ7 755 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 NTPCRQ9BSD7 190 aaKnown RBP13.06□□□□□ -0.32
KNTC1-208ENST00000535410 TCHPQ9BT92 498 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 HERC2P3Q9BVR0 1158 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 KLK14Q9P0G3 267 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 TNFSF13BQ9Y275 285 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 HCN4Q9Y3Q4 1203 aa13.06□□□□□ -0.32
KNTC1-208ENST00000535410 PRR33A8MZF0 331 aa13.05□□□□□ -0.32
KNTC1-208ENST00000535410 PLS3P13797 630 aa13.05□□□□□ -0.32
KNTC1-208ENST00000535410 HERC4Q5GLZ8 1057 aaPredicted RBP13.05□□□□□ -0.32
KNTC1-208ENST00000535410 CYP26C1Q6V0L0 522 aa13.05□□□□□ -0.32
KNTC1-208ENST00000535410 GSTCDQ8NEC7 633 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms