RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PANK4Q9NVE7 773 aa24.94■■□□□ 1.58
SFSWAP-204ENST00000535399 SERTAD1Q9UHV2 236 aa24.94■■□□□ 1.58
SFSWAP-204ENST00000535399 TRANK1O15050 2925 aa24.94■■□□□ 1.58
SFSWAP-204ENST00000535399 ARL5CA6NH57 179 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 GRM6O15303 877 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 MLH1P40692 756 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 NDUFA8P51970 172 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 HERC4Q5GLZ8 1057 aaPredicted RBP24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 MPZL3Q6UWV2 235 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 ZNF720Q7Z2F6 126 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 FSIP1Q8NA03 581 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 ZBTB45Q96K62 511 aaPredicted RBP24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 ZFP42Q96MM3 310 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 GOLPH3LQ9H4A5 285 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 NRDE2Q9H7Z3 1164 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 SNTG2Q9NY99 539 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 LMCD1Q9NZU5 365 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 CHMP5Q9NZZ3 219 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 PARP2Q9UGN5 583 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 PLAGL2Q9UPG8 496 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 PCDHB12Q9Y5F1 795 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 ZMYM2Q9UBW7 1377 aa24.93■■□□□ 1.58
SFSWAP-204ENST00000535399 GTPBP6O43824 516 aaPredicted RBP24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 B4GALT3O60512 393 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 TOM1L1O75674 476 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 PPP1R37O75864 691 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 PIGRP01833 764 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 ITGB1P05556 798 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 SYKP43405 635 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 ZNF568Q3ZCX4 644 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 ZC2HC1CQ53FD0 456 aaPredicted RBP24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 KCNT2Q6UVM3 1135 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 APBB1IPQ7Z5R6 666 aaPredicted RBP24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 CCDC65Q8IXS2 484 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 CEP57L1Q8IYX8 460 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 GSTCDQ8NEC7 633 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 MRPS27Q92552 414 aaKnown RBP24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 ZNF558Q96NG5 402 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 STRA6Q9BX79 667 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 OLFML3Q9NRN5 406 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 MIOSQ9NXC5 875 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 KLK14Q9P0G3 267 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 TBC1D7Q9P0N9 293 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 KANSL3Q9P2N6 904 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 USP25Q9UHP3 1055 aa24.92■■□□□ 1.58
SFSWAP-204ENST00000535399 TCHHQ07283 1943 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 RECQL4O94761 1208 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 POMCP01189 267 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 MCF2P10911 925 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 ABCD1P33897 745 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 PBX3P40426 434 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 COASYQ13057 564 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 CSPP1Q1MSJ5 1256 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 TPRNQ4KMQ1 711 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 ZBTB33Q86T24 672 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 ZNF280BQ86YH2 543 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 MAP4K3Q8IVH8 894 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 GRAMD1CQ8IYS0 662 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 MAFAQ8NHW3 353 aaPredicted RBP24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 SPPL3Q8TCT6 385 aa24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 MRPL44Q9H9J2 332 aaKnown RBP24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 ALG13Q9NP73 1137 aaKnown RBP24.91■■□□□ 1.58
SFSWAP-204ENST00000535399 RALGAPA2Q2PPJ7 1873 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 DDHD2O94830 711 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 CASP1P29466 404 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 GRM5P41594 1212 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 AFMP43652 599 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 SCNN1GP51170 649 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 BCAR1P56945 870 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 ASIC1P78348 528 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 RNASELQ05823 741 aaKnown RBP24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 CEP120Q8N960 986 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 MRPL38Q96DV4 380 aaKnown RBP24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 BICD1Q96G01 975 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 PAGE5Q96GU1 130 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 TCHPQ9BT92 498 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 FGFBP2Q9BYJ0 223 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 HAPLN2Q9GZV7 340 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 BLZF1Q9H2G9 400 aa24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 COL4A4P53420 1690 aaPredicted RBP24.9■■□□□ 1.58
SFSWAP-204ENST00000535399 COL6A3P12111 3177 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 MYH11P35749 1972 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 ZC3H11AO75152 810 aaKnown RBP eCLIP24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 FGF18O76093 207 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 DNAJB1P25685 340 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 CASP5P51878 434 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 MCL1Q07820 350 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 PTPROQ16827 1216 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 THNSL1Q8IYQ7 743 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 SLC39A11Q8N1S5 342 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 HVCN1Q96D96 273 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 GBP3Q9H0R5 595 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 LMAN2LQ9H0V9 348 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 TSHZ2Q9NRE2 1034 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 ANKFY1Q9P2R3 1169 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 DNAJB4Q9UDY4 337 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 GDAQ9Y2T3 454 aa24.89■■□□□ 1.58
SFSWAP-204ENST00000535399 PRRC2BQ5JSZ5 2229 aaKnown RBP24.89■■□□□ 1.57
SFSWAP-204ENST00000535399 GALTP07902 379 aa24.88■■□□□ 1.57
SFSWAP-204ENST00000535399 MYBP10242 640 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms