RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 MARCH5Q9NX47 278 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 MIOSQ9NXC5 875 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 CDH22Q9UJ99 828 aa17.9■□□□□ 0.46
CLSTN3-204ENST00000535313 TECTAO75443 2155 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 TMEM221A6NGB7 291 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 M0R296 226 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 C2CD2LO14523 706 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 N4BP3O15049 544 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 CNPP09543 421 aaKnown RBP17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 NAMPTP43490 491 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 PTGDRQ13258 359 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 PRPF4BQ13523 1007 aaKnown RBP17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 PDIA5Q14554 519 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 FAM187BQ17R55 369 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 IFT74Q96LB3 600 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 FBXL18Q96ME1 805 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 RPS6KC1Q96S38 1066 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 POMKQ9H5K3 350 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 UPF2Q9HAU5 1272 aaKnown RBP17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 KLK14Q9P0G3 267 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 KIAA1024Q9UPX6 916 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 ZMYM2Q9UBW7 1377 aa17.89■□□□□ 0.45
CLSTN3-204ENST00000535313 LILRB3O75022 631 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 PRKCBP05771 671 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 WEE2P0C1S8 567 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 LIG1P18858 919 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 CLCN4P51793 760 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 GRIK3Q13003 919 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 PTPN21Q16825 1174 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 KIAA1841Q6NSI8 718 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 SNX29Q8TEQ0 813 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 BSNDQ8WZ55 320 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 PBXIP1Q96AQ6 731 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 ADPGKQ9BRR6 497 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 BHMT2Q9H2M3 363 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 SFXN1Q9H9B4 322 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 PCDHB6Q9Y5E3 794 aa17.88■□□□□ 0.45
CLSTN3-204ENST00000535313 LAD1O00515 517 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 ACKR2O00590 384 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 ADH1AP07327 375 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 GLUD2P49448 558 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 TOB1P50616 345 aaPredicted RBP17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 SIGLEC14Q08ET2 396 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 ECM1Q16610 540 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 KRT79Q5XKE5 535 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 MCTP1Q6DN14 999 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 KANK3Q6NY19 840 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 ELMSAN1Q6PJG2 1045 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 TMC5Q6UXY8 1006 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 TAS1R1Q7RTX1 841 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 BMP8AQ7Z5Y6 402 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 GSTCDQ8NEC7 633 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 KIFAP3Q92845 792 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 KCNH6Q9H252 994 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 PDZD7Q9H5P4 517 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 DDX19AQ9NUU7 478 aaKnown RBP17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 DPP7Q9UHL4 492 aa17.87■□□□□ 0.45
CLSTN3-204ENST00000535313 C2CD4DB7Z1M9 353 aa17.86■□□□□ 0.45
CLSTN3-204ENST00000535313 EFNA5P52803 228 aa17.86■□□□□ 0.45
CLSTN3-204ENST00000535313 DTHD1Q6ZMT9 781 aa17.86■□□□□ 0.45
CLSTN3-204ENST00000535313 IGSF22Q8N9C0 903 aa17.86■□□□□ 0.45
CLSTN3-204ENST00000535313 TDRD5Q8NAT2 981 aaKnown RBP17.86■□□□□ 0.45
CLSTN3-204ENST00000535313 DAXXQ9UER7 740 aaPredicted RBP17.86■□□□□ 0.45
CLSTN3-204ENST00000535313 DNM3Q9UQ16 869 aa17.86■□□□□ 0.45
CLSTN3-204ENST00000535313 TDRD15B5MCY1 1934 aaKnown RBP17.86■□□□□ 0.45
CLSTN3-204ENST00000535313 TTLL13PA6NNM8 815 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 F8W810 466 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 TEX28O15482 410 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 TADA2AO75478 443 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 PRPHP41219 470 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 DSG1Q02413 1049 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 KIAA0319Q5VV43 1072 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 FUT10Q6P4F1 479 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 GPR149Q86SP6 731 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 SUGP1Q8IWZ8 645 aaKnown RBP17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 RNF168Q8IYW5 571 aaPredicted RBP17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 PLCD3Q8N3E9 789 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 TMX3Q96JJ7 454 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 KIFC3Q9BVG8 833 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 CCDC113Q9H0I3 377 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 SNTG2Q9NY99 539 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 ADAM28Q9UKQ2 775 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 USTQ9Y2C2 406 aa17.85■□□□□ 0.45
CLSTN3-204ENST00000535313 H3BQV1 296 aa17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 EFEMP2O95967 443 aa17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 GLUD1P00367 558 aa17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 TUSC3Q13454 348 aa17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 MTMR3Q13615 1198 aa17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 USP41Q3LFD5 358 aa17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 DCAF4L1Q3SXM0 396 aa17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 RILPL1Q5EBL4 403 aa17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 APBB1IPQ7Z5R6 666 aaPredicted RBP17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 KREMEN2Q8NCW0 462 aa17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 RXFP1Q9HBX9 757 aa17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 POLD4Q9HCU8 107 aa17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 MAN1C1Q9NR34 630 aa17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 CHST7Q9NS84 486 aa17.84■□□□□ 0.45
CLSTN3-204ENST00000535313 USP20Q9Y2K6 914 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms