RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 ZSWIM4Q9H7M6 989 aa12.87□□□□□ -0.35
CTNND1-238ENST00000534647 KCNK12Q9HB15 430 aa12.87□□□□□ -0.35
CTNND1-238ENST00000534647 NPDC1Q9NQX5 325 aaPredicted RBP12.87□□□□□ -0.35
CTNND1-238ENST00000534647 IGSF5Q9NSI5 407 aa12.87□□□□□ -0.35
CTNND1-238ENST00000534647 CDKL5O76039 1030 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 LYPLA2O95372 231 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 SEC24BO95487 1268 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 NPR3P17342 541 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 AOC1P19801 751 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 PTENP60484 403 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 FOXK2Q01167 660 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 SPIRE1Q08AE8 756 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 ELMSAN1Q6PJG2 1045 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 RNF149Q8NC42 400 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 FEZF2Q8TBJ5 459 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 AIFM3Q96NN9 605 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 IPO9Q96P70 1041 aaKnown RBP12.86□□□□□ -0.35
CTNND1-238ENST00000534647 LXNQ9BS40 222 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 HERC2P3Q9BVR0 1158 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 SLKQ9H2G2 1235 aaPredicted RBP12.86□□□□□ -0.35
CTNND1-238ENST00000534647 MFSD1Q9H3U5 465 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 WDR6Q9NNW5 1121 aaKnown RBP12.86□□□□□ -0.35
CTNND1-238ENST00000534647 CHST7Q9NS84 486 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 MARCH5Q9NX47 278 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 DUSP12Q9UNI6 340 aa12.86□□□□□ -0.35
CTNND1-238ENST00000534647 C2orf72A6NCS6 295 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 PRR23AA6NEV1 266 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 ARL5CA6NH57 179 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 POMCP01189 267 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 URODP06132 367 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 ADH1AP07327 375 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 ITGA4P13612 1032 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 XBP1P17861 261 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 RFX1P22670 979 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 DSG1Q02413 1049 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 NCBP1Q09161 790 aaKnown RBP12.85□□□□□ -0.35
CTNND1-238ENST00000534647 EMC2Q15006 297 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 CWF19L1Q69YN2 538 aaKnown RBP12.85□□□□□ -0.35
CTNND1-238ENST00000534647 ASCL5Q7RTU5 278 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 SLFN12Q8IYM2 578 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 NXPE3Q969Y0 559 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 HSD17B14Q9BPX1 270 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 RTP3Q9BQQ7 232 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 NFKBIZQ9BYH8 718 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 PLEKHA4Q9H4M7 779 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 EPS15L1Q9UBC2 864 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 WNT16Q9UBV4 365 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 KCNJ14Q9UNX9 436 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 IPPQ9Y573 584 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 PTPRZ1P23471 2315 aaPredicted RBP12.85□□□□□ -0.35
CTNND1-238ENST00000534647 STK36Q9NRP7 1315 aa12.85□□□□□ -0.35
CTNND1-238ENST00000534647 USP34Q70CQ2 3546 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 RIF1Q5UIP0 2472 aaKnown RBP12.84□□□□□ -0.35
CTNND1-238ENST00000534647 ZMYM2Q9UBW7 1377 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 CCDC195A0A1B0GUA6 201 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 TEX28O15482 410 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 CCNT1O60563 726 aaKnown RBP12.84□□□□□ -0.35
CTNND1-238ENST00000534647 TSPAN1O60635 241 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 N4BP1O75113 896 aaKnown RBP12.84□□□□□ -0.35
CTNND1-238ENST00000534647 NR1I2O75469 434 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 ERLIN2O94905 339 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 SLITRK3O94933 977 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 BAG4O95429 457 aaKnown RBP12.84□□□□□ -0.35
CTNND1-238ENST00000534647 SSBP05455 408 aaKnown RBP eCLIP12.84□□□□□ -0.35
CTNND1-238ENST00000534647 GLUD2P49448 558 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 TFDP1Q14186 410 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 XKR9Q5GH70 373 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 NOTUMQ6P988 496 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 TAS1R1Q7RTX1 841 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 CCDC105Q8IYK2 499 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 STAMQ92783 540 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 MTRQ99707 1265 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 CSRNP2Q9H175 543 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 XPNPEP1Q9NQW7 623 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 MAN1C1Q9NR34 630 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 ANKEF1Q9NU02 776 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 PDRG1Q9NUG6 133 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 RGL1Q9NZL6 768 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 FNIP2Q9P278 1114 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 GIT1Q9Y2X7 761 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 PLXNA3P51805 1871 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 DENND4AQ7Z401 1863 aa12.84□□□□□ -0.35
CTNND1-238ENST00000534647 ZBTB39O15060 712 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 PI15O43692 258 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 GLUD1P00367 558 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 XRCC6P12956 609 aaKnown RBP eCLIP12.83□□□□□ -0.36
CTNND1-238ENST00000534647 ARL2P36404 184 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 AK2P54819 239 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 SCRN1Q12765 414 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 STK3Q13188 491 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 LILRA6Q6PI73 481 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 PIK3AP1Q6ZUJ8 805 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 GSTCDQ8NEC7 633 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 NKD2Q969F2 451 aaPredicted RBP12.83□□□□□ -0.36
CTNND1-238ENST00000534647 DYDC2Q96IM9 177 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 TBC1D32Q96NH3 1257 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 GAD1Q99259 594 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 COLEC11Q9BWP8 271 aa12.83□□□□□ -0.36
CTNND1-238ENST00000534647 EIF2AQ9BY44 585 aaKnown RBP12.83□□□□□ -0.36
CTNND1-238ENST00000534647 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms