RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 SLC30A5Q8TAD4 765 aa14.49□□□□□ -0.09
BEST1-208ENST00000534553 PRPF31Q8WWY3 499 aaKnown RBP14.49□□□□□ -0.09
BEST1-208ENST00000534553 SYT11Q9BT88 431 aa14.49□□□□□ -0.09
BEST1-208ENST00000534553 TRPC6Q9Y210 931 aa14.49□□□□□ -0.09
BEST1-208ENST00000534553 SRCAPQ6ZRS2 3230 aa14.49□□□□□ -0.09
BEST1-208ENST00000534553 A0A0B4J269 797 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 MAGEB2O15479 319 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 TOM1L1O75674 476 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 MCM3P25205 808 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 KLRC1P26715 233 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 GCNT1Q02742 428 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 MAP2K1Q02750 393 aaPredicted RBP14.48□□□□□ -0.09
BEST1-208ENST00000534553 ARHGAP1Q07960 439 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 MAPK6Q16659 721 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 TAPT1Q6NXT6 567 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 SV2AQ7L0J3 742 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 PLEKHH3Q7Z736 793 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 DPP9Q86TI2 863 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 SYCE1Q8N0S2 351 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 NFKBIZQ9BYH8 718 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 RRAGCQ9HB90 399 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.48□□□□□ -0.09
BEST1-208ENST00000534553 PLXNB2O15031 1838 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 ZNF236Q9UL36 1845 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 SLC15A5A6NIM6 579 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 ZBTB42B2RXF5 422 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 DDX3XO00571 662 aaKnown RBP eCLIP14.48□□□□□ -0.09
BEST1-208ENST00000534553 CLDN3O15551 220 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 TNFAIP3P21580 790 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 LAMTOR4Q0VGL1 99 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 SURF1Q15526 300 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 ARHGAP44Q17R89 818 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 C15orf39Q6ZRI6 1047 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 ZNF572Q7Z3I7 529 aaPredicted RBP14.48□□□□□ -0.09
BEST1-208ENST00000534553 FAM71AQ8IYT1 594 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 ZSWIM2Q8NEG5 633 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 SHC3Q92529 594 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 MSTO1Q9BUK6 570 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 CCDC113Q9H0I3 377 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 ABHD16BQ9H3Z7 469 aa14.48□□□□□ -0.09
BEST1-208ENST00000534553 PUF60Q9UHX1 559 aaKnown RBP14.48□□□□□ -0.09
BEST1-208ENST00000534553 ADGRA2Q96PE1 1338 aa14.47□□□□□ -0.09
BEST1-208ENST00000534553 ZNFX1Q9P2E3 1918 aaKnown RBP14.47□□□□□ -0.09
BEST1-208ENST00000534553 MANSC4A6NHS7 340 aaPredicted RBP14.47□□□□□ -0.09
BEST1-208ENST00000534553 FOXN3O00409 490 aaPredicted RBP14.47□□□□□ -0.09
BEST1-208ENST00000534553 CES2O00748 559 aa14.47□□□□□ -0.09
BEST1-208ENST00000534553 PPFIA4O75335 1185 aa14.47□□□□□ -0.09
BEST1-208ENST00000534553 TMEM253P0C7T8 217 aa14.47□□□□□ -0.09
BEST1-208ENST00000534553 DLATP10515 647 aaKnown RBP14.47□□□□□ -0.09
BEST1-208ENST00000534553 MARK3P27448 753 aa14.47□□□□□ -0.09
BEST1-208ENST00000534553 ZACNQ401N2 412 aa14.47□□□□□ -0.09
BEST1-208ENST00000534553 CCDC70Q6NSX1 233 aa14.47□□□□□ -0.09
BEST1-208ENST00000534553 FBXO38Q6PIJ6 1188 aa14.47□□□□□ -0.09
BEST1-208ENST00000534553 PPM1KQ8N3J5 372 aa14.47□□□□□ -0.09
BEST1-208ENST00000534553 MSANTD4Q8NCY6 345 aa14.47□□□□□ -0.09
BEST1-208ENST00000534553 CAGE1Q8TC20 777 aa14.47□□□□□ -0.09
BEST1-208ENST00000534553 CTNNBL1Q8WYA6 563 aaPredicted RBP14.47□□□□□ -0.09
BEST1-208ENST00000534553 AGPAT1Q99943 283 aa14.47□□□□□ -0.09
BEST1-208ENST00000534553 C1orf112Q9NSG2 853 aa14.47□□□□□ -0.09
BEST1-208ENST00000534553 RBAKQ9NYW8 714 aaPredicted RBP14.47□□□□□ -0.09
BEST1-208ENST00000534553 MSCO60682 206 aa14.46□□□□□ -0.09
BEST1-208ENST00000534553 LGALS2P05162 132 aa14.46□□□□□ -0.09
BEST1-208ENST00000534553 MATR3P43243 847 aaKnown RBP eCLIP14.46□□□□□ -0.09
BEST1-208ENST00000534553 BRD3Q15059 726 aa14.46□□□□□ -0.09
BEST1-208ENST00000534553 WDR44Q5JSH3 913 aa14.46□□□□□ -0.09
BEST1-208ENST00000534553 TRIM50Q86XT4 487 aa14.46□□□□□ -0.09
BEST1-208ENST00000534553 GPIHBP1Q8IV16 184 aa14.46□□□□□ -0.09
BEST1-208ENST00000534553 ARHGEF19Q8IW93 802 aa14.46□□□□□ -0.09
BEST1-208ENST00000534553 DHX38Q92620 1227 aaKnown RBP14.46□□□□□ -0.09
BEST1-208ENST00000534553 MAML3Q96JK9 1138 aa14.46□□□□□ -0.09
BEST1-208ENST00000534553 OSBPL9Q96SU4 736 aa14.46□□□□□ -0.09
BEST1-208ENST00000534553 TARS2Q9BW92 718 aaKnown RBP14.46□□□□□ -0.09
BEST1-208ENST00000534553 KATNBL1Q9H079 304 aa14.46□□□□□ -0.09
BEST1-208ENST00000534553 PDGFCQ9NRA1 345 aa14.46□□□□□ -0.09
BEST1-208ENST00000534553 SUCLA2Q9P2R7 463 aaPredicted RBP14.46□□□□□ -0.09
BEST1-208ENST00000534553 HDAC6Q9UBN7 1215 aa14.46□□□□□ -0.09
BEST1-208ENST00000534553 SALL4Q9UJQ4 1053 aa14.46□□□□□ -0.09
BEST1-208ENST00000534553 CCDC151A5D8V7 595 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 ANKRD62A6NC57 917 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 ATP8B1O43520 1251 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 BUB1O43683 1085 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 LRRN2O75325 713 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 TNNI1P19237 187 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 PAFAH1B1P43034 410 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 IQSEC1Q6DN90 963 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 TMCO3Q6UWJ1 677 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 GLYCTKQ8IVS8 523 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 RHOT2Q8IXI1 618 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 RNF149Q8NC42 400 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 LNX1Q8TBB1 728 aaPredicted RBP14.45□□□□□ -0.1
BEST1-208ENST00000534553 HELQQ8TDG4 1101 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 TAS1R2Q8TE23 839 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 U2AF1L4Q8WU68 220 aaKnown RBP14.45□□□□□ -0.1
BEST1-208ENST00000534553 RFFLQ8WZ73 363 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 RUBCNQ92622 972 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 COPS5Q92905 334 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 CGRRF1Q99675 332 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 TINF2Q9BSI4 451 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 SUGCTQ9HAC7 445 aa14.45□□□□□ -0.1
BEST1-208ENST00000534553 ANKFY1Q9P2R3 1169 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms