RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	BCL7C	Q8WUZ0	217 aa	Predicted RBP	5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	MTMR8	Q96EF0	704 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	TMEM169	Q96HH4	297 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	UPF3B	Q9BZI7	483 aa	Known RBP	5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ADAMTS10	Q9H324	1103 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	SMURF1	Q9HCE7	757 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	EMC7	Q9NPA0	242 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	LMCD1	Q9NZU5	365 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	FBLN5	Q9UBX5	448 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ADGRE2	Q9UHX3	823 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	MSRA	Q9UJ68	235 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ANGPTL2	Q9UKU9	493 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442		X6R8D5	127 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	MGAM	O43451	1857 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442	RTL1	A6NKG5	1358 aa		5.79	□□□□□ -1.48
ECHDC1-223	ENST00000534442		A0A1W2PQ45	241 aa	Predicted RBP	5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442		A0A1W2PQY0	241 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	BTBD19	C9JJ37	291 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	GABRD	O14764	452 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ARHGAP6	O43182	974 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ZGLP1	P0C6A0	271 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	COL6A2	P12110	1019 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	EPHB1	P54762	984 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ZP2	Q05996	745 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	RAB30	Q15771	203 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ARHGAP44	Q17R89	818 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ATP13A4	Q4VNC1	1196 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	RALGPS1	Q5JS13	557 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	FSTL4	Q6MZW2	842 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	SPRED2	Q7Z698	418 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	KCNG4	Q8TDN1	519 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	MISP3	Q96FF7	219 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	VTA1	Q9NP79	307 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	OXSM	Q9NWU1	459 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	MARCH2	Q9P0N8	246 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	TRHDE	Q9UKU6	1024 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	FAN1	Q9Y2M0	1017 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	RWDD3	Q9Y3V2	267 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	ATP6V0A2	Q9Y487	856 aa		5.78	□□□□□ -1.48
ECHDC1-223	ENST00000534442	SH3TC1	Q8TE82	1336 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	TRIM43B	A6NCK2	446 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	NOTO	A8MTQ0	251 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	C22orf46	C9J442	243 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	NKRF	O15226	690 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	TGM5	O43548	720 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	USP2	O75604	605 aa	Predicted RBP	5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	HMGCR	P04035	888 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	FUCA1	P04066	466 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	MSL3P1	P0C860	447 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	CD8B	P10966	210 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	KIR2DL1	P43626	348 aa	Predicted RBP	5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	KIR2DL2	P43627	348 aa	Predicted RBP	5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	NEK2	P51955	445 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	GPR19	Q15760	415 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	NFE2	Q16621	373 aa	Predicted RBP	5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	LEXM	Q3ZCV2	418 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	CCDC181	Q5TID7	509 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SYDE2	Q5VT97	1194 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ARHGAP36	Q6ZRI8	547 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	OTOP3	Q7RTS5	596 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SH3RF2	Q8TEC5	729 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	TRIM43	Q96BQ3	446 aa	Predicted RBP	5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ASIC4	Q96FT7	647 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	TRMT2B	Q96GJ1	504 aa	Known RBP	5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SMAD5	Q99717	465 aa	Known RBP	5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	YIPF4	Q9BSR8	244 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	UBE2Z	Q9H832	354 aa	Predicted RBP	5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	PDLIM7	Q9NR12	457 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	BSDC1	Q9NW68	430 aa	Predicted RBP	5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SLAMF8	Q9P0V8	285 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	YBX2	Q9Y2T7	364 aa	Known RBP	5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ABCC12	Q96J65	1359 aa		5.77	□□□□□ -1.49
ECHDC1-223	ENST00000534442		K7ESF4	209 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	DVL2	O14641	736 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	KCNK3	O14649	394 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	MSTN	O14793	375 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	EFEMP2	O95967	443 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	GNAT1	P11488	350 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	KRT15	P19012	456 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	KCNA5	P22460	613 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	RAB27A	P51159	221 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	KPNA1	P52294	538 aa	Predicted RBP	5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	KIR3DS1	Q14943	382 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	HSF5	Q4G112	596 aa	Predicted RBP	5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	HHIPL2	Q6UWX4	724 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ZNF574	Q6ZN55	896 aa	Predicted RBP	5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	PTRH1	Q86Y79	214 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	CBARP	Q8N350	705 aa	Predicted RBP	5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	PANK1	Q8TE04	598 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	TSR2	Q969E8	191 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ZCCHC17	Q9NP64	241 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	TCEAL9	Q9UHQ7	104 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	OTOF	Q9HC10	1997 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	DUOX1	Q9NRD9	1551 aa		5.76	□□□□□ -1.49
ECHDC1-223	ENST00000534442	TNKS	O95271	1327 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	FREM2	Q5SZK8	3169 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SLC12A8	A0AV02	714 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	MAN2B1	O00754	1011 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	AKAP10	O43572	662 aa		5.75	□□□□□ -1.49

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