RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 NCOR1O75376 2440 aa17■□□□□ 0.31
UBXN1-217ENST00000534176 H3BQ06 376 aaPredicted RBP16.99■□□□□ 0.31
UBXN1-217ENST00000534176 POMCP01189 267 aa16.99■□□□□ 0.31
UBXN1-217ENST00000534176 LTBRP36941 435 aa16.99■□□□□ 0.31
UBXN1-217ENST00000534176 SLC11A1P49279 550 aa16.99■□□□□ 0.31
UBXN1-217ENST00000534176 YARSP54577 528 aaKnown RBP16.99■□□□□ 0.31
UBXN1-217ENST00000534176 CREMQ03060 361 aa16.99■□□□□ 0.31
UBXN1-217ENST00000534176 SMAD2Q15796 467 aaKnown RBP16.99■□□□□ 0.31
UBXN1-217ENST00000534176 KYAT1Q16773 422 aa16.99■□□□□ 0.31
UBXN1-217ENST00000534176 TPRNQ4KMQ1 711 aa16.99■□□□□ 0.31
UBXN1-217ENST00000534176 COLGALT2Q8IYK4 626 aa16.99■□□□□ 0.31
UBXN1-217ENST00000534176 DAW1Q8N136 415 aa16.99■□□□□ 0.31
UBXN1-217ENST00000534176 RUSC1Q9BVN2 902 aa16.99■□□□□ 0.31
UBXN1-217ENST00000534176 EMILIN2Q9BXX0 1053 aa16.99■□□□□ 0.31
UBXN1-217ENST00000534176 ZBP1Q9H171 429 aa16.99■□□□□ 0.31
UBXN1-217ENST00000534176 ATG2AQ2TAZ0 1938 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 C2orf71A6NGG8 1288 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 NRP1O14786 923 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 DDHD2O94830 711 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 CXCL14O95715 111 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 THP07101 528 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 DDIT3P35638 169 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 PBX3P40426 434 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 MAPK7Q13164 816 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 SLC39A14Q15043 492 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 PTPAQ15257 358 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 ZPBP2Q6X784 338 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 KCNK18Q7Z418 384 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 ADGRD2Q7Z7M1 963 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 RBM23Q86U06 439 aaKnown RBP16.98■□□□□ 0.31
UBXN1-217ENST00000534176 ZNF280BQ86YH2 543 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 FAM178BQ8IXR5 827 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 KRI1Q8N9T8 703 aaKnown RBP16.98■□□□□ 0.31
UBXN1-217ENST00000534176 SMRP1Q8NCR6 262 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 LARP4BQ92615 738 aaKnown RBP16.98■□□□□ 0.31
UBXN1-217ENST00000534176 RAD54LQ92698 747 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 MSLNLQ96KJ4 702 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 CCDC94Q9BW85 323 aaPredicted RBP16.98■□□□□ 0.31
UBXN1-217ENST00000534176 APOL6Q9BWW8 343 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 PARVGQ9HBI0 331 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 MRPL17Q9NRX2 175 aaKnown RBP16.98■□□□□ 0.31
UBXN1-217ENST00000534176 DZANK1Q9NVP4 752 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 DNAJB4Q9UDY4 337 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 HES2Q9Y543 173 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 REV3LO60673 3130 aa16.98■□□□□ 0.31
UBXN1-217ENST00000534176 MYO7AQ13402 2215 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 NT5C1B-RDH14C9J2C7 533 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 TBX10O75333 385 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 TOM1L1O75674 476 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 BRD1O95696 1058 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 SOD2P04179 222 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 KRT18P05783 430 aaKnown RBP16.97■□□□□ 0.31
UBXN1-217ENST00000534176 URODP06132 367 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 MCF2P10911 925 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 LIG1P18858 919 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 OR1G1P47890 313 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 NASPP49321 788 aaPredicted RBP16.97■□□□□ 0.31
UBXN1-217ENST00000534176 SCNN1GP51170 649 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 ELAVL2Q12926 359 aaKnown RBP16.97■□□□□ 0.31
UBXN1-217ENST00000534176 TUSC3Q13454 348 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 CCDC73Q6ZRK6 1079 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 ADHFE1Q8IWW8 467 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 UROC1Q96N76 676 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 ACO2Q99798 780 aaKnown RBP16.97■□□□□ 0.31
UBXN1-217ENST00000534176 RNF39Q9H2S5 420 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.97■□□□□ 0.314e-6■■■□□ 19
UBXN1-217ENST00000534176 SLC38A7Q9NVC3 462 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 CLIC4Q9Y696 253 aa16.97■□□□□ 0.31
UBXN1-217ENST00000534176 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.96■□□□□ 0.31
UBXN1-217ENST00000534176 MBTPS2O43462 519 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 PPP6R2O75170 966 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 TBCAO75347 108 aaKnown RBP16.96■□□□□ 0.31
UBXN1-217ENST00000534176 FAM13AO94988 1023 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 CSPG5O95196 566 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 PLCG1P19174 1290 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 AKAP5P24588 427 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 GRM5P41594 1212 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 ZNF131P52739 623 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 ITIH3Q06033 890 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 KCNC3Q14003 757 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 ZNF568Q3ZCX4 644 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 PDXDC1Q6P996 788 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 MPZL3Q6UWV2 235 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 GPBP1Q86WP2 473 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 ZFP42Q96MM3 310 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 TCHPQ9BT92 498 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 KIFC3Q9BVG8 833 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 C1QTNF1Q9BXJ1 281 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 LRRC27Q9C0I9 530 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 SEL1LQ9UBV2 794 aa16.96■□□□□ 0.31
UBXN1-217ENST00000534176 FBXO2Q9UK22 296 aaPredicted RBP16.96■□□□□ 0.31
UBXN1-217ENST00000534176 TDRD15B5MCY1 1934 aaKnown RBP16.96■□□□□ 0.3
UBXN1-217ENST00000534176 SF3B1O75533 1304 aaKnown RBP eCLIP16.96■□□□□ 0.3
UBXN1-217ENST00000534176 HIDE1A8MVS5 230 aa16.95■□□□□ 0.3
UBXN1-217ENST00000534176 RECQL4O94761 1208 aa16.95■□□□□ 0.3
UBXN1-217ENST00000534176 YEATS4O95619 227 aa16.95■□□□□ 0.3
UBXN1-217ENST00000534176 CA8P35219 290 aa16.95■□□□□ 0.3
UBXN1-217ENST00000534176 NCKAP1LP55160 1127 aa16.95■□□□□ 0.3
UBXN1-217ENST00000534176 KARSQ15046 597 aaKnown RBP16.95■□□□□ 0.3
UBXN1-217ENST00000534176 STK38Q15208 465 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms