RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	CCT2	P78371	535 aa	Known RBP	4.7	□□□□□ -1.66
RDX-215	ENST00000533961	ELAVL1	Q15717	326 aa	Known RBP	4.7	□□□□□ -1.66
RDX-215	ENST00000533961	CT83	Q5H943	113 aa		4.7	□□□□□ -1.66
RDX-215	ENST00000533961	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.7	□□□□□ -1.66
RDX-215	ENST00000533961	LMBR1L	Q6UX01	489 aa		4.7	□□□□□ -1.66
RDX-215	ENST00000533961	TAS1R1	Q7RTX1	841 aa		4.7	□□□□□ -1.66
RDX-215	ENST00000533961	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.7	□□□□□ -1.66
RDX-215	ENST00000533961	MDGA1	Q8NFP4	955 aa		4.7	□□□□□ -1.66
RDX-215	ENST00000533961	WDR66	Q8TBY9	1149 aa		4.7	□□□□□ -1.66
RDX-215	ENST00000533961	GAB3	Q8WWW8	586 aa		4.7	□□□□□ -1.66
RDX-215	ENST00000533961	MTMR8	Q96EF0	704 aa		4.7	□□□□□ -1.66
RDX-215	ENST00000533961	RPL10L	Q96L21	214 aa	Known RBP	4.7	□□□□□ -1.66
RDX-215	ENST00000533961	ACAP3	Q96P50	834 aa		4.7	□□□□□ -1.66
RDX-215	ENST00000533961	BBC3	Q96PG8	261 aa	Predicted RBP	4.7	□□□□□ -1.66
RDX-215	ENST00000533961	C14orf119	Q9NWQ9	140 aa		4.7	□□□□□ -1.66
RDX-215	ENST00000533961	APOBEC2	Q9Y235	224 aa	Known RBP	4.7	□□□□□ -1.66
RDX-215	ENST00000533961	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.69	□□□□□ -1.66
RDX-215	ENST00000533961	PROB1	E7EW31	1015 aa		4.69	□□□□□ -1.66
RDX-215	ENST00000533961	PCDH8	O95206	1070 aa		4.69	□□□□□ -1.66
RDX-215	ENST00000533961	MT-CO1	P00395	513 aa		4.69	□□□□□ -1.66
RDX-215	ENST00000533961	GNAT2	P19087	354 aa		4.69	□□□□□ -1.66
RDX-215	ENST00000533961	IARS	P41252	1262 aa	Known RBP	4.69	□□□□□ -1.66
RDX-215	ENST00000533961	RGS19	P49795	217 aa		4.69	□□□□□ -1.66
RDX-215	ENST00000533961	C19orf54	Q5BKX5	351 aa		4.69	□□□□□ -1.66
RDX-215	ENST00000533961	IQSEC1	Q6DN90	963 aa		4.69	□□□□□ -1.66
RDX-215	ENST00000533961	CCDC62	Q6P9F0	684 aa		4.69	□□□□□ -1.66
RDX-215	ENST00000533961	CXorf67	Q86X51	503 aa	Predicted RBP	4.69	□□□□□ -1.66
RDX-215	ENST00000533961	OR14C36	Q8NHC7	312 aa		4.69	□□□□□ -1.66
RDX-215	ENST00000533961	ZNF512	Q96ME7	567 aa	Predicted RBP	4.69	□□□□□ -1.66
RDX-215	ENST00000533961	SOX7	Q9BT81	388 aa		4.69	□□□□□ -1.66
RDX-215	ENST00000533961	PPP2R3B	Q9Y5P8	575 aa		4.69	□□□□□ -1.66
RDX-215	ENST00000533961	PRSS38	A1L453	326 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	ALDH1A2	O94788	518 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	GAST	P01350	101 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	GYPE	P15421	78 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	SCNN1G	P51170	649 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	GUCY2F	P51841	1108 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	MTMR1	Q13613	665 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	TOB2	Q14106	344 aa	Predicted RBP	4.68	□□□□□ -1.66
RDX-215	ENST00000533961	PTPA	Q15257	358 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	ABCB5	Q2M3G0	1257 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	DOK3	Q7L591	496 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	FAM83A	Q86UY5	434 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	VRK3	Q8IV63	474 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	CNTD1	Q8N815	330 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.68	□□□□□ -1.66
RDX-215	ENST00000533961	ST8SIA2	Q92186	375 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	LENG9	Q96B70	501 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	ENKD1	Q9H0I2	346 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	QRSL1	Q9H0R6	528 aa	Known RBP	4.68	□□□□□ -1.66
RDX-215	ENST00000533961	SLC5A4	Q9NY91	659 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	USP18	Q9UMW8	372 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	NOC2L	Q9Y3T9	749 aa	Known RBP	4.68	□□□□□ -1.66
RDX-215	ENST00000533961	XDH	P47989	1333 aa		4.68	□□□□□ -1.66
RDX-215	ENST00000533961	hCG_2014768	A0A024R1R8	64 aa		4.67	□□□□□ -1.66
RDX-215	ENST00000533961	PHF2	O75151	1096 aa		4.67	□□□□□ -1.66
RDX-215	ENST00000533961	RECQL4	O94761	1208 aa		4.67	□□□□□ -1.66
RDX-215	ENST00000533961	LY86	O95711	162 aa		4.67	□□□□□ -1.66
RDX-215	ENST00000533961	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.67	□□□□□ -1.66
RDX-215	ENST00000533961	MANF	P55145	182 aa	Known RBP	4.67	□□□□□ -1.66
RDX-215	ENST00000533961	ITK	Q08881	620 aa		4.67	□□□□□ -1.66
RDX-215	ENST00000533961	TRIM25	Q14258	630 aa	Known RBP	4.67	□□□□□ -1.66
RDX-215	ENST00000533961	FAM180A	Q6UWF9	173 aa		4.67	□□□□□ -1.66
RDX-215	ENST00000533961	SYNE4	Q8N205	404 aa		4.67	□□□□□ -1.66
RDX-215	ENST00000533961	STAG1	Q8WVM7	1258 aa		4.67	□□□□□ -1.66
RDX-215	ENST00000533961	EAF2	Q96CJ1	260 aa	Predicted RBP	4.67	□□□□□ -1.66
RDX-215	ENST00000533961	RAX2	Q96IS3	184 aa		4.67	□□□□□ -1.66
RDX-215	ENST00000533961	SLC2A13	Q96QE2	648 aa		4.67	□□□□□ -1.66
RDX-215	ENST00000533961	GPR87	Q9BY21	358 aa		4.67	□□□□□ -1.66
RDX-215	ENST00000533961	PRSS50	Q9UI38	385 aa		4.67	□□□□□ -1.66
RDX-215	ENST00000533961		A0A1W2PR48	441 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	DIRC3	C9JPN6	131 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	TRIM24	O15164	1050 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	HOXA3	O43365	443 aa	Predicted RBP	4.66	□□□□□ -1.66
RDX-215	ENST00000533961	LTA4H	P09960	611 aa	Known RBP	4.66	□□□□□ -1.66
RDX-215	ENST00000533961	OSM	P13725	252 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	MTHFD2	P13995	350 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	CANX	P27824	592 aa	Known RBP	4.66	□□□□□ -1.66
RDX-215	ENST00000533961	GZMK	P49863	264 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	RABGGTB	P53611	331 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	SRSF2	Q01130	221 aa	Known RBP	4.66	□□□□□ -1.66
RDX-215	ENST00000533961	DUSP2	Q05923	314 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	CD69	Q07108	199 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	BRDT	Q58F21	947 aa	Predicted RBP	4.66	□□□□□ -1.66
RDX-215	ENST00000533961	RABL3	Q5HYI8	236 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	PITRM1	Q5JRX3	1037 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	LY6G5C	Q5SRR4	150 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961		Q6ZRM9	215 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	PDZD4	Q76G19	769 aa	Predicted RBP	4.66	□□□□□ -1.66
RDX-215	ENST00000533961	RAVER1	Q8IY67	606 aa	Known RBP	4.66	□□□□□ -1.66
RDX-215	ENST00000533961	IL17RA	Q96F46	866 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	MNT	Q99583	582 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	MCM8	Q9UJA3	840 aa		4.66	□□□□□ -1.66
RDX-215	ENST00000533961	PHLDB1	Q86UU1	1377 aa		4.65	□□□□□ -1.66
RDX-215	ENST00000533961	KLRG2	A4D1S0	409 aa	Predicted RBP	4.65	□□□□□ -1.67
RDX-215	ENST00000533961	GOLGA8A	A7E2F4	631 aa		4.65	□□□□□ -1.67
RDX-215	ENST00000533961	MGAT1	P26572	445 aa		4.65	□□□□□ -1.67
RDX-215	ENST00000533961	MRPL49	Q13405	166 aa	Known RBP	4.65	□□□□□ -1.67
RDX-215	ENST00000533961	FSCN1	Q16658	493 aa	Known RBP	4.65	□□□□□ -1.67
RDX-215	ENST00000533961	ANO4	Q32M45	955 aa		4.65	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms