RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 HDAC7Q8WUI4 952 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 PRPF31Q8WWY3 499 aaKnown RBP10.33□□□□□ -0.76
PACS1-214ENST00000533811 CEP170P1Q96L14 293 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 KXD1Q9BQD3 176 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 GPR62Q9BZJ7 368 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 TRIM6Q9C030 488 aaPredicted RBP10.33□□□□□ -0.76
PACS1-214ENST00000533811 UBN1Q9NPG3 1134 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.33□□□□□ -0.76
PACS1-214ENST00000533811 MIOSQ9NXC5 875 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 CDH7Q9ULB5 785 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 MTF2Q9Y483 593 aaPredicted RBP10.33□□□□□ -0.76
PACS1-214ENST00000533811 FRYLO94915 3013 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 RALGAPA1Q6GYQ0 2036 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 MAP1BP46821 2468 aaKnown RBP10.32□□□□□ -0.76
PACS1-214ENST00000533811 CCL16O15467 120 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 ZMYND10O75800 440 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 KCNA4P22459 653 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 RCAN1P53805 252 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 LAMTOR4Q0VGL1 99 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 ZNF528Q3MIS6 628 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 Q4G0T1 1027 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 SLC44A4Q53GD3 710 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 LIN9Q5TKA1 542 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 TSSK4Q6SA08 328 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 Q6ZUG5 572 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 MTSS1LQ765P7 747 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 RNF168Q8IYW5 571 aaPredicted RBP10.32□□□□□ -0.76
PACS1-214ENST00000533811 GPR161Q8N6U8 529 aaKnown RBP10.32□□□□□ -0.76
PACS1-214ENST00000533811 ZNF579Q8NAF0 562 aaKnown RBP10.32□□□□□ -0.76
PACS1-214ENST00000533811 BRF1Q92994 677 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 LTB4R2Q9NPC1 389 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 CACNG4Q9UBN1 327 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 GMEB2Q9UKD1 530 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 FBXO4Q9UKT5 387 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 PCDHGA2Q9Y5H1 932 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 ZFP37Q9Y6Q3 630 aaPredicted RBP10.32□□□□□ -0.76
PACS1-214ENST00000533811 CACNA1GO43497 2377 aa10.32□□□□□ -0.76
PACS1-214ENST00000533811 PRR5-ARHGAP8B1AHC4 643 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 INO80B-WBP1J3KQ70 363 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 EML1O00423 815 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 TADA2AO75478 443 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 QARSP47897 775 aaKnown RBP10.31□□□□□ -0.76
PACS1-214ENST00000533811 ARHGAP8P85298 464 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 CREMQ03060 361 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 LMNB2Q03252 620 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 PRKCQQ04759 706 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 DSC1Q08554 894 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 NCBP1Q09161 790 aaKnown RBP10.31□□□□□ -0.76
PACS1-214ENST00000533811 KRT32Q14532 448 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 EMC2Q15006 297 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 LPAL2Q16609 132 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 ST3GAL2Q16842 350 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 PPM1LQ5SGD2 360 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 ZBTB41Q5SVQ8 909 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 NOTUMQ6P988 496 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 TPRG1Q6ZUI0 275 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 CEP57Q86XR8 500 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 HACE1Q8IYU2 909 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 HASPINQ8TF76 798 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 TCP11Q8WWU5 503 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 ING5Q8WYH8 240 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 FGF13Q92913 245 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 CHAMP1Q96JM3 812 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 PHF20Q9BVI0 1012 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 NXF3Q9H4D5 531 aaKnown RBP10.31□□□□□ -0.76
PACS1-214ENST00000533811 CHST7Q9NS84 486 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 ZSCAN32Q9NX65 697 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 KLK14Q9P0G3 267 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 FNIP2Q9P278 1114 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 PARP2Q9UGN5 583 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 ADAM28Q9UKQ2 775 aa10.31□□□□□ -0.76
PACS1-214ENST00000533811 MARCH6O60337 910 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 TSPAN1O60635 241 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 DKC1O60832 514 aaKnown RBP eCLIP10.3□□□□□ -0.76
PACS1-214ENST00000533811 XYLBO75191 536 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 NPTXRO95502 500 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 EFEMP2O95967 443 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 NEFLP07196 543 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 C8AP07357 584 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 AKAP5P24588 427 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 TARSP26639 723 aaKnown RBP10.3□□□□□ -0.76
PACS1-214ENST00000533811 RFC5P40937 340 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 CCT2P78371 535 aaKnown RBP10.3□□□□□ -0.76
PACS1-214ENST00000533811 IRX6P78412 446 aaPredicted RBP10.3□□□□□ -0.76
PACS1-214ENST00000533811 PFKPQ01813 784 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 PSMD5Q16401 504 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 XKR9Q5GH70 373 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 RTP2Q5QGT7 225 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 LILRA6Q6PI73 481 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 B3GNT9Q6UX72 402 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 FERMT3Q86UX7 667 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 CDR2LQ86X02 465 aaPredicted RBP10.3□□□□□ -0.76
PACS1-214ENST00000533811 EXOC8Q8IYI6 725 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 ITFG1Q8TB96 612 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 ETNPPLQ8TBG4 499 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 JAKMIP1Q96N16 626 aaKnown RBP10.3□□□□□ -0.76
PACS1-214ENST00000533811 RTKNQ9BST9 563 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 DDX23Q9BUQ8 820 aaKnown RBP10.3□□□□□ -0.76
PACS1-214ENST00000533811 RNF26Q9BY78 433 aaPredicted RBP10.3□□□□□ -0.76
PACS1-214ENST00000533811 C22orf23Q9BZE7 217 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms