RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 LRRC26Q2I0M4 334 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 TRIM60Q495X7 471 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 ZCWPW2Q504Y3 356 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 FKBP15Q5T1M5 1219 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 EFCAB12Q6NXP0 572 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 FILIP1Q7Z7B0 1213 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 USP37Q86T82 979 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 SERINC5Q86VE9 423 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 ZBTB8OSQ8IWT0 167 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 KCNN1Q92952 543 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 CNOT6LQ96LI5 555 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 MAP7D2Q96T17 732 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 XPO4Q9C0E2 1151 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 TRPV6Q9H1D0 765 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 HSD3B7Q9H2F3 369 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 KCTD10Q9H3F6 313 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 SUGCTQ9HAC7 445 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 METTL14Q9HCE5 456 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 ATP11BQ9Y2G3 1177 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 FRMD4BQ9Y2L6 1034 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 MKI67P46013 3256 aaKnown RBP11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 A0A1B0GTH6 734 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 SMIM35A0A1B0GVV1 85 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 PES1O00541 588 aaKnown RBP11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 PRPF6O94906 941 aaKnown RBP11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 CD4P01730 458 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 CYP2C9P11712 490 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 NMT1P30419 496 aaKnown RBP11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 CASP5P51878 434 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 PMS1P54277 932 aaKnown RBP11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 PTK7Q13308 1070 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 HIC1Q14526 733 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 CCDC40Q4G0X9 1142 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 RSPH3Q86UC2 560 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 TMEM174Q8WUU8 243 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 IQCDQ96DY2 449 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 MED15Q96RN5 788 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 CEP89Q96ST8 783 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 DUSP9Q99956 384 aaKnown RBP11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 MKNK1Q9BUB5 465 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 GPRC5CQ9NQ84 441 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 XPNPEP1Q9NQW7 623 aa11.96□□□□□ -0.5
CCDC90B-218ENST00000533761 IGKV6-21A0A0C4DH24 114 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 DENND3A2RUS2 1198 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 GRXCR2A6NFK2 248 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 LRRIQ4A6NIV6 560 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 KIAA0391O15091 583 aaKnown RBP11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 SLC16A4O15374 487 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 NR3C1P04150 777 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 ARL2P36404 184 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 FAAP100Q0VG06 881 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 KRT31Q15323 416 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 HSP90AA4PQ58FG1 418 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 MAP4K3Q8IVH8 894 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 NME8Q8N427 588 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 CCDC155Q8N6L0 562 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 TMEM161BQ8NDZ6 487 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 BICD1Q96G01 975 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 FIZ1Q96SL8 496 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 TUBGCP2Q9BSJ2 902 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 NOC4LQ9BVI4 516 aaKnown RBP11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 STRA6Q9BX79 667 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 ARHGAP28Q9P2N2 729 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 TBX20Q9UMR3 447 aa11.95□□□□□ -0.5
CCDC90B-218ENST00000533761 TRIP12Q14669 1992 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 K7ERI5 159 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 HNRNPDLO14979 420 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 CLTBP09497 229 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 PSMC2P35998 433 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 RPIAP49247 311 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 MARSP56192 900 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 BFSP2Q13515 415 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 TRIM14Q14142 442 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 MAN2A1Q16706 1144 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 ZC2HC1CQ53FD0 456 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 SPECC1LQ69YQ0 1117 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 SLFN12LQ6IEE8 588 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 LRRC55Q6ZSA7 311 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 FRMD5Q7Z6J6 570 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 RPAINQ86UA6 219 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 SLC9A9Q8IVB4 645 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 C12orf56Q8IXR9 622 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 ZC3H3Q8IXZ2 948 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 KIAA0319LQ8IZA0 1049 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 GLIS3Q8NEA6 775 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 CAGE1Q8TC20 777 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 TMEM143Q96AN5 459 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 FGFBP2Q9BYJ0 223 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 FAM49AQ9H0Q0 323 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 TMEM134Q9H6X4 195 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 AGPAT3Q9NRZ7 376 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 TMEM39AQ9NV64 488 aa11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 SUCLA2Q9P2R7 463 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 ARMCX3Q9UH62 379 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.94□□□□□ -0.5
CCDC90B-218ENST00000533761 CAND2O75155 1236 aa11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 PHKA2P46019 1235 aa11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 COPB1P53618 953 aaKnown RBP11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 POU5F1BQ06416 359 aa11.93□□□□□ -0.5
CCDC90B-218ENST00000533761 ARMCX5Q6P1M9 558 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms