RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.93□□□□□ -0.18
RPUSD4-208ENST00000533628 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.93□□□□□ -0.18
RPUSD4-208ENST00000533628 DGKIO75912 1065 aa13.93□□□□□ -0.18
RPUSD4-208ENST00000533628 SKIP12755 728 aa13.93□□□□□ -0.18
RPUSD4-208ENST00000533628 MCL1Q07820 350 aa13.93□□□□□ -0.18
RPUSD4-208ENST00000533628 LRIT3Q3SXY7 679 aa13.93□□□□□ -0.18
RPUSD4-208ENST00000533628 MPZL3Q6UWV2 235 aa13.93□□□□□ -0.18
RPUSD4-208ENST00000533628 AGMOQ6ZNB7 445 aa13.93□□□□□ -0.18
RPUSD4-208ENST00000533628 ZNF689Q96CS4 500 aaPredicted RBP13.93□□□□□ -0.18
RPUSD4-208ENST00000533628 TGFB1I1O43294 461 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 UPP2O95045 317 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 MBD3O95983 291 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 STAG3L1P0CL83 205 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 MCF2P10911 925 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 BMP6P22004 513 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 ADSSP30520 456 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 CCDC173Q0VFZ6 552 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 DCAF4L1Q3SXM0 396 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 STXBP4Q6ZWJ1 553 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 LPPQ93052 612 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 CCDC47Q96A33 483 aaKnown RBP13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 PPP1R9BQ96SB3 815 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 NXF3Q9H4D5 531 aaKnown RBP13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 TMEM206Q9H813 350 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 RMND1Q9NWS8 449 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 KIAA1468Q9P260 1216 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 HES2Q9Y543 173 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 PCDHB7Q9Y5E2 793 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 A0A0B4J269 797 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 HNRNPDLO14979 420 aaKnown RBP13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 FAM189A1O60320 539 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 LIG4P49917 911 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 GATMP50440 423 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 RABGGTBP53611 331 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 ZNF568Q3ZCX4 644 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 COBLL1Q53SF7 1204 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 CLLU1OSQ5K130 101 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 ZNF658Q5TYW1 1059 aaPredicted RBP13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 FAM117BQ6P1L5 589 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 NUP62CLQ9H1M0 184 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 EXOC7Q9UPT5 735 aa13.92□□□□□ -0.18
RPUSD4-208ENST00000533628 GBF1Q92538 1859 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 FGFR1P11362 822 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 MORC3Q14149 939 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 TMEM132AQ24JP5 1023 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 ZBTB33Q86T24 672 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 CEP120Q8N960 986 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 SP7Q8TDD2 431 aaPredicted RBP13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 IPO4Q8TEX9 1081 aaKnown RBP13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 BICD1Q96G01 975 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 ADPGKQ9BRR6 497 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 KCTD10Q9H3F6 313 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 FNDC1Q4ZHG4 1894 aaPredicted RBP13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 INPPL1O15357 1258 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 CLDN3O15551 220 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 MEFVO15553 781 aaPredicted RBP13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 MYOGP15173 224 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 PBX2P40425 430 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 GRM5P41594 1212 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 SMAD3P84022 425 aaKnown RBP13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 NOLC1Q14978 699 aaKnown RBP eCLIP13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 KNOP1Q1ED39 458 aaKnown RBP13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 RBM43Q6ZSC3 357 aaKnown RBP13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 NELFCDQ8IXH7 590 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 TMEM192Q8IY95 271 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 SMYD4Q8IYR2 804 aaPredicted RBP13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 GUF1Q8N442 669 aaKnown RBP13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 PGBD4Q96DM1 585 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 CASD1Q96PB1 797 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 RAD9AQ99638 391 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 PBX4Q9BYU1 374 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 SNTG2Q9NY99 539 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 LRFN2Q9ULH4 789 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 YBX2Q9Y2T7 364 aaKnown RBP13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 PCDHA11Q9Y5I1 949 aa13.91□□□□□ -0.18
RPUSD4-208ENST00000533628 DYNC1I1O14576 645 aa13.9□□□□□ -0.18
RPUSD4-208ENST00000533628 ITGA4P13612 1032 aa13.9□□□□□ -0.18
RPUSD4-208ENST00000533628 AFF1P51825 1210 aaKnown RBP13.9□□□□□ -0.18
RPUSD4-208ENST00000533628 ISM2Q6H9L7 571 aa13.9□□□□□ -0.18
RPUSD4-208ENST00000533628 SLFN12LQ6IEE8 588 aa13.9□□□□□ -0.18
RPUSD4-208ENST00000533628 SYCP3Q8IZU3 236 aa13.9□□□□□ -0.18
RPUSD4-208ENST00000533628 GSTCDQ8NEC7 633 aa13.9□□□□□ -0.18
RPUSD4-208ENST00000533628 TCHPQ9BT92 498 aa13.9□□□□□ -0.18
RPUSD4-208ENST00000533628 TRIM6Q9C030 488 aaPredicted RBP13.9□□□□□ -0.18
RPUSD4-208ENST00000533628 GBP3Q9H0R5 595 aa13.9□□□□□ -0.18
RPUSD4-208ENST00000533628 CXCL16Q9H2A7 254 aa13.9□□□□□ -0.18
RPUSD4-208ENST00000533628 ANKFY1Q9P2R3 1169 aa13.9□□□□□ -0.18
RPUSD4-208ENST00000533628 LCHNA4D1U4 455 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 ARHGEF15O94989 841 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 KIF20AO95235 890 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 LINC00271P0C7V0 271 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 IBSPP21815 317 aaPredicted RBP13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 GARTP22102 1010 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 AKAP5P24588 427 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 PRCPP42785 496 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 ZBTB41Q5SVQ8 909 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 RNF169Q8NCN4 708 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 ZSWIM2Q8NEG5 633 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 CBWD1Q9BRT8 395 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms