RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 MNTQ99583 582 aa3.67□□□□□ -1.82
ATM-220ENST00000533526 GPR87Q9BY21 358 aa3.67□□□□□ -1.82
ATM-220ENST00000533526 SAP30BPQ9UHR5 308 aaKnown RBP3.67□□□□□ -1.82
ATM-220ENST00000533526 PCDHGA2Q9Y5H1 932 aa3.67□□□□□ -1.82
ATM-220ENST00000533526 TBKBP1A7MCY6 615 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 PRR5-ARHGAP8B1AHC4 643 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 B5MCH6 92 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 GABRDO14764 452 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 PLSCR1O15162 318 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 KATNA1O75449 491 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 PEX11BO96011 259 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 OSMP13725 252 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 IL2RBP14784 551 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 MGAT1P26572 445 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 PTPN7P35236 360 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 WASP42768 502 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 FLT3LGP49771 235 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 EVA1CP58658 441 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 CCT2P78371 535 aaKnown RBP3.66□□□□□ -1.82
ATM-220ENST00000533526 EXOSC10Q01780 885 aaKnown RBP3.66□□□□□ -1.82
ATM-220ENST00000533526 MGAT2Q10469 447 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 SP140Q13342 867 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 FOXE3Q13461 319 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 FAM50AQ14320 339 aaKnown RBP3.66□□□□□ -1.82
ATM-220ENST00000533526 PUM1Q14671 1186 aaKnown RBP eCLIP3.66□□□□□ -1.82
ATM-220ENST00000533526 RRP1BQ14684 758 aaKnown RBP3.66□□□□□ -1.82
ATM-220ENST00000533526 NOMO1Q15155 1222 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 RNF207Q6ZRF8 634 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 HTR3DQ70Z44 454 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 SPRED1Q7Z699 444 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 LILRA3Q8N6C8 439 aaPredicted RBP3.66□□□□□ -1.82
ATM-220ENST00000533526 EXTL1Q92935 676 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 MTMR8Q96EF0 704 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 UHRF1Q96T88 793 aaPredicted RBP3.66□□□□□ -1.82
ATM-220ENST00000533526 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 SLC13A1Q9BZW2 595 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 TYW1Q9NV66 732 aaKnown RBP3.66□□□□□ -1.82
ATM-220ENST00000533526 TRPS1Q9UHF7 1281 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 DNM3Q9UQ16 869 aa3.66□□□□□ -1.82
ATM-220ENST00000533526 LOC105371045A0A1W2PR82 267 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 PJA2O43164 708 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 TEX33O43247 280 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 STC2O76061 302 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 RECQL4O94761 1208 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 SREBF1P36956 1147 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 IARSP41252 1262 aaKnown RBP3.65□□□□□ -1.83
ATM-220ENST00000533526 RABGGTBP53611 331 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 SLC16A1P53985 500 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 KRTAP10-2P60368 255 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 PPP3CAQ08209 521 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 ACAP2Q15057 778 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 VPS72Q15906 364 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 BMT2Q1RMZ1 405 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 MIIPQ5JXC2 388 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 EFCAB2Q5VUJ9 269 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 EFCAB12Q6NXP0 572 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 DRICH1Q6PGQ1 229 aaPredicted RBP3.65□□□□□ -1.83
ATM-220ENST00000533526 Q6ZVL8 140 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 GPRIN1Q7Z2K8 1008 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 PNMA8AQ86V59 439 aaPredicted RBP3.65□□□□□ -1.83
ATM-220ENST00000533526 MB21D1Q8N884 522 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.65□□□□□ -1.83
ATM-220ENST00000533526 ZFP28Q8NHY6 868 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 IL17DQ8TAD2 202 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 ZNF503Q96F45 646 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 SLC2A13Q96QE2 648 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 DCLRE1CQ96SD1 692 aaKnown RBP3.65□□□□□ -1.83
ATM-220ENST00000533526 C7orf25Q9BPX7 421 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 CCDC8Q9H0W5 538 aaPredicted RBP3.65□□□□□ -1.83
ATM-220ENST00000533526 MANSC1Q9H8J5 431 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 TMEM140Q9NV12 185 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 MOCS1Q9NZB8 636 aa3.65□□□□□ -1.83
ATM-220ENST00000533526 ZMYM3Q14202 1370 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 KLRG2A4D1S0 409 aaPredicted RBP3.64□□□□□ -1.83
ATM-220ENST00000533526 DIRC3C9JPN6 131 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 MATN3O15232 486 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 XPOTO43592 962 aaKnown RBP3.64□□□□□ -1.83
ATM-220ENST00000533526 NDUFS2O75306 463 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 PPFIA4O75335 1185 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 MT-CO1P00395 513 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 AMHP03971 560 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 RPLP2P05387 115 aaKnown RBP3.64□□□□□ -1.83
ATM-220ENST00000533526 SNRPA1P09661 255 aaKnown RBP3.64□□□□□ -1.83
ATM-220ENST00000533526 HK1P19367 917 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 TNFRSF1AP19438 455 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 SCNN1GP51170 649 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 PTPN21Q16825 1174 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 FAM214AQ32MH5 1076 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 RRP12Q5JTH9 1297 aaKnown RBP3.64□□□□□ -1.83
ATM-220ENST00000533526 PRAMEF14Q5SWL7 426 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 PPP4R3AQ6IN85 833 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 Q6ZRM9 215 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 USP51Q70EK9 711 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 ZNF572Q7Z3I7 529 aaPredicted RBP3.64□□□□□ -1.83
ATM-220ENST00000533526 GGNQ86UU5 652 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 PQLC1Q8N2U9 271 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 PPM1NQ8N819 430 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 OR52N2Q8NGI0 321 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 MDM1Q8TC05 714 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 CASKIN2Q8WXE0 1202 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms