RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SLC17A8Q8NDX2 589 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 CFAP61Q8NHU2 1237 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 ANKS1AQ92625 1134 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 VCPKMTQ9H867 229 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 RAD51CO43502 376 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 NR3C2P08235 984 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 BARGINQ6ZT62 677 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 KCNK18Q7Z418 384 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 RNF149Q8NC42 400 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 TMEM35BQ8NCS4 154 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 BBOF1Q8ND07 529 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 ERGIC2Q96RQ1 377 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 TRAIPQ9BWF2 469 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 KCNH7Q9NS40 1196 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 HOXC10Q9NYD6 342 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 ARHGAP20Q9P2F6 1191 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 AGO2Q9UKV8 859 aaKnown RBP13.03□□□□□ -0.32
BDNF-218ENST00000533246 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 MIF4GDA9UHW6 222 aaKnown RBP13.03□□□□□ -0.32
BDNF-218ENST00000533246 ZBTB39O15060 712 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 ERFP50548 548 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
BDNF-218ENST00000533246 RSRC2Q7L4I2 434 aaKnown RBP13.03□□□□□ -0.32
BDNF-218ENST00000533246 MICALL2Q8IY33 904 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 LBHD1Q9BQE6 289 aaPredicted RBP13.03□□□□□ -0.32
BDNF-218ENST00000533246 CNOT7Q9UIV1 285 aaKnown RBP13.03□□□□□ -0.32
BDNF-218ENST00000533246 SUGT1Q9Y2Z0 365 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 MST1RQ04912 1400 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 PRPSAP2O60256 369 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 MT-ND3P03897 115 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 ARP10275 920 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 GNA15P30679 374 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
BDNF-218ENST00000533246 LMNB2Q03252 620 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 GABPAQ06546 454 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 TSNAXIP1Q2TAA8 658 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 ZNF699Q32M78 642 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 KBTBD12Q3ZCT8 623 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 TRIM65Q6PJ69 517 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 PDIK1LQ8N165 341 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 PSPC1Q8WXF1 523 aaKnown RBP13.03□□□□□ -0.32
BDNF-218ENST00000533246 EZH1Q92800 747 aaPredicted RBP13.03□□□□□ -0.32
BDNF-218ENST00000533246 C9orf72Q96LT7 481 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 EDEM3Q9BZQ6 932 aa13.03□□□□□ -0.32
BDNF-218ENST00000533246 RASA4BC9J798 803 aa13.02□□□□□ -0.32
BDNF-218ENST00000533246 POLRMTO00411 1230 aaKnown RBP13.02□□□□□ -0.32
BDNF-218ENST00000533246 RASA4O43374 803 aa13.02□□□□□ -0.32
BDNF-218ENST00000533246 RINT1Q6NUQ1 792 aa13.02□□□□□ -0.32
BDNF-218ENST00000533246 CATSPER4Q7RTX7 472 aa13.02□□□□□ -0.32
BDNF-218ENST00000533246 KIAA0895Q8NCT3 520 aa13.02□□□□□ -0.32
BDNF-218ENST00000533246 ZNF302Q9NR11 478 aa13.02□□□□□ -0.32
BDNF-218ENST00000533246 APEX2Q9UBZ4 518 aa13.02□□□□□ -0.32
BDNF-218ENST00000533246 USP20Q9Y2K6 914 aa13.02□□□□□ -0.32
BDNF-218ENST00000533246 SARSP49591 514 aaKnown RBP13.02□□□□□ -0.33
BDNF-218ENST00000533246 PMS2P54278 862 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 MTA1Q13330 715 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 ALCAMQ13740 583 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 SLFN12LQ6IEE8 588 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 COL23A1Q86Y22 540 aaPredicted RBP13.02□□□□□ -0.33
BDNF-218ENST00000533246 RAB3IL1Q8TBN0 382 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 ATG4CQ96DT6 458 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 CFAP36Q96G28 342 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 SCYL1Q96KG9 808 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 SPATA17Q96L03 361 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 FUT8Q9BYC5 575 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 SLC38A10Q9HBR0 1119 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 ZNRF3Q9ULT6 936 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 SYNGAP1Q96PV0 1343 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 ITSN1Q15811 1721 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 PODXLO00592 558 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 CRCPO75575 148 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 DYNC1I2Q13409 638 aaKnown RBP13.02□□□□□ -0.33
BDNF-218ENST00000533246 MAP7Q14244 749 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 WDR72Q3MJ13 1102 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 KLHDC7AQ5VTJ3 777 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 WDR75Q8IWA0 830 aaKnown RBP13.02□□□□□ -0.33
BDNF-218ENST00000533246 MCUQ8NE86 351 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 SLC10A4Q96EP9 437 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 TAAR1Q96RJ0 339 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 MIS12Q9H081 205 aa13.02□□□□□ -0.33
BDNF-218ENST00000533246 ALG13Q9NP73 1137 aaKnown RBP13.02□□□□□ -0.33
BDNF-218ENST00000533246 RIMBP3CA6NJZ7 1639 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 RIMBP3BA6NNM3 1639 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 RIMBP3Q9UFD9 1639 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 ZSCAN5CA6NGD5 496 aaPredicted RBP13.01□□□□□ -0.33
BDNF-218ENST00000533246 FOXN3O00409 490 aaPredicted RBP13.01□□□□□ -0.33
BDNF-218ENST00000533246 ATP6V1G1O75348 118 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 AKAP3O75969 853 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 PDHA1P08559 390 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 GBP1P32455 592 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 SNRNP35Q16560 246 aaKnown RBP13.01□□□□□ -0.33
BDNF-218ENST00000533246 C6orf118Q5T5N4 469 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 ZC3H18Q86VM9 953 aaKnown RBP13.01□□□□□ -0.33
BDNF-218ENST00000533246 ZKSCAN4Q969J2 545 aaPredicted RBP13.01□□□□□ -0.33
BDNF-218ENST00000533246 RPS6KC1Q96S38 1066 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 STK33Q9BYT3 514 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 MMADHCQ9H3L0 296 aaPredicted RBP13.01□□□□□ -0.33
BDNF-218ENST00000533246 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 INTS13Q9NVM9 706 aa13.01□□□□□ -0.33
BDNF-218ENST00000533246 INTUQ9ULD6 942 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms