RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 HAUS6Q7Z4H7 955 aa22.47■■□□□ 1.19
CCS-208ENST00000533244 ZNF280BQ86YH2 543 aa22.47■■□□□ 1.19
CCS-208ENST00000533244 MYCT1Q8N699 235 aa22.47■■□□□ 1.19
CCS-208ENST00000533244 ZFP42Q96MM3 310 aa22.47■■□□□ 1.19
CCS-208ENST00000533244 TARS2Q9BW92 718 aaKnown RBP22.47■■□□□ 1.19
CCS-208ENST00000533244 APOL6Q9BWW8 343 aa22.47■■□□□ 1.19
CCS-208ENST00000533244 CUEDC2Q9H467 287 aa22.47■■□□□ 1.19
CCS-208ENST00000533244 TRAK2O60296 914 aa22.46■■□□□ 1.19
CCS-208ENST00000533244 DDHD2O94830 711 aa22.46■■□□□ 1.19
CCS-208ENST00000533244 ZPBP2Q6X784 338 aa22.46■■□□□ 1.19
CCS-208ENST00000533244 DYMQ7RTS9 669 aa22.46■■□□□ 1.19
CCS-208ENST00000533244 CDT1Q9H211 546 aa22.46■■□□□ 1.19
CCS-208ENST00000533244 ST6GALNAC4Q9H4F1 302 aa22.46■■□□□ 1.19
CCS-208ENST00000533244 NSUN3Q9H649 340 aaKnown RBP22.46■■□□□ 1.19
CCS-208ENST00000533244 PRDM6Q9NQX0 595 aa22.46■■□□□ 1.19
CCS-208ENST00000533244 KBTBD4Q9NVX7 518 aa22.46■■□□□ 1.19
CCS-208ENST00000533244 MIOSQ9NXC5 875 aa22.46■■□□□ 1.19
CCS-208ENST00000533244 SPG21Q9NZD8 308 aa22.46■■□□□ 1.19
CCS-208ENST00000533244 DNAJB4Q9UDY4 337 aa22.46■■□□□ 1.19
CCS-208ENST00000533244 FRMD3A2A2Y4 597 aa22.45■■□□□ 1.18
CCS-208ENST00000533244 ZC3H11AO75152 810 aaKnown RBP eCLIP22.45■■□□□ 1.183e-6■■■□□ 16.8
CCS-208ENST00000533244 POMCP01189 267 aa22.45■■□□□ 1.18
CCS-208ENST00000533244 GALTP07902 379 aa22.45■■□□□ 1.18
CCS-208ENST00000533244 ALDH7A1P49419 539 aaKnown RBP22.45■■□□□ 1.18
CCS-208ENST00000533244 SCNN1GP51170 649 aa22.45■■□□□ 1.18
CCS-208ENST00000533244 NUCB2P80303 420 aa22.45■■□□□ 1.18
CCS-208ENST00000533244 RNASELQ05823 741 aaKnown RBP22.45■■□□□ 1.18
CCS-208ENST00000533244 DSC1Q08554 894 aa22.45■■□□□ 1.18
CCS-208ENST00000533244 STRN3Q13033 797 aa22.45■■□□□ 1.18
CCS-208ENST00000533244 MRPS27Q92552 414 aaKnown RBP22.45■■□□□ 1.18
CCS-208ENST00000533244 SPATA32Q96LK8 384 aa22.45■■□□□ 1.18
CCS-208ENST00000533244 TMEM175Q9BSA9 504 aa22.45■■□□□ 1.18
CCS-208ENST00000533244 TNMDQ9H2S6 317 aa22.45■■□□□ 1.18
CCS-208ENST00000533244 SNTG2Q9NY99 539 aa22.45■■□□□ 1.18
CCS-208ENST00000533244 TCHHQ07283 1943 aa22.45■■□□□ 1.18
CCS-208ENST00000533244 TDRD15B5MCY1 1934 aaKnown RBP22.44■■□□□ 1.18
CCS-208ENST00000533244 K7ENM7 598 aa22.44■■□□□ 1.18
CCS-208ENST00000533244 IRS1P35568 1242 aa22.44■■□□□ 1.18
CCS-208ENST00000533244 SLC11A1P49279 550 aa22.44■■□□□ 1.18
CCS-208ENST00000533244 COL19A1Q14993 1142 aa22.44■■□□□ 1.18
CCS-208ENST00000533244 MPZL3Q6UWV2 235 aa22.44■■□□□ 1.18
CCS-208ENST00000533244 APBB1IPQ7Z5R6 666 aaPredicted RBP22.44■■□□□ 1.18
CCS-208ENST00000533244 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.44■■□□□ 1.18
CCS-208ENST00000533244 FAM178BQ8IXR5 827 aa22.44■■□□□ 1.18
CCS-208ENST00000533244 IQUBQ8NA54 791 aa22.44■■□□□ 1.18
CCS-208ENST00000533244 ZHX3Q9H4I2 956 aa22.44■■□□□ 1.18
CCS-208ENST00000533244 SEL1LQ9UBV2 794 aa22.44■■□□□ 1.18
CCS-208ENST00000533244 PARP2Q9UGN5 583 aa22.44■■□□□ 1.18
CCS-208ENST00000533244 BRWD1Q9NSI6 2320 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 FSCN2O14926 492 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 TOM1L1O75674 476 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 RECQL4O94761 1208 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 PIGRP01833 764 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 MCF2P10911 925 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 ABCD1P33897 745 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 GTF2BQ00403 316 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 ZNF568Q3ZCX4 644 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 TCEAL5Q5H9L2 206 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 TMEM173Q86WV6 379 aaPredicted RBP22.43■■□□□ 1.18
CCS-208ENST00000533244 SFR1Q86XK3 245 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 COLGALT2Q8IYK4 626 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 SLC17A8Q8NDX2 589 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 DHX58Q96C10 678 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 SCAND2PQ9GZW5 306 aaPredicted RBP22.43■■□□□ 1.18
CCS-208ENST00000533244 GBP3Q9H0R5 595 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 TLR9Q9NR96 1032 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 FAM13BQ9NYF5 915 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 KLK14Q9P0G3 267 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 TBX20Q9UMR3 447 aa22.43■■□□□ 1.18
CCS-208ENST00000533244 NT5C1B-RDH14C9J2C7 533 aa22.42■■□□□ 1.18
CCS-208ENST00000533244 GAP43P17677 238 aa22.42■■□□□ 1.18
CCS-208ENST00000533244 NMT1P30419 496 aaKnown RBP22.42■■□□□ 1.18
CCS-208ENST00000533244 GRM5P41594 1212 aa22.42■■□□□ 1.18
CCS-208ENST00000533244 GRIK3Q13003 919 aa22.42■■□□□ 1.18
CCS-208ENST00000533244 ADALQ6DHV7 355 aa22.42■■□□□ 1.18
CCS-208ENST00000533244 CNNM4Q6P4Q7 775 aa22.42■■□□□ 1.18
CCS-208ENST00000533244 CEP120Q8N960 986 aa22.42■■□□□ 1.18
CCS-208ENST00000533244 BCL7CQ8WUZ0 217 aaPredicted RBP22.42■■□□□ 1.18
CCS-208ENST00000533244 IGSF21Q96ID5 467 aa22.42■■□□□ 1.18
CCS-208ENST00000533244 STRA6Q9BX79 667 aa22.42■■□□□ 1.18
CCS-208ENST00000533244 MAGEF1Q9HAY2 307 aa22.42■■□□□ 1.18
CCS-208ENST00000533244 THEGQ9P2T0 379 aa22.42■■□□□ 1.18
CCS-208ENST00000533244 PTGESO14684 152 aa22.41■■□□□ 1.18
CCS-208ENST00000533244 POLR2DO15514 142 aaKnown RBP22.41■■□□□ 1.18
CCS-208ENST00000533244 PPP1R37O75864 691 aa22.41■■□□□ 1.18
CCS-208ENST00000533244 ERVFC1P60507 584 aa22.41■■□□□ 1.18
CCS-208ENST00000533244 KRT17Q04695 432 aa22.41■■□□□ 1.18
CCS-208ENST00000533244 PDE12Q6L8Q7 609 aaKnown RBP22.41■■□□□ 1.18
CCS-208ENST00000533244 MAP4K3Q8IVH8 894 aa22.41■■□□□ 1.18
CCS-208ENST00000533244 ZBTB45Q96K62 511 aaPredicted RBP22.41■■□□□ 1.18
CCS-208ENST00000533244 FAM193BQ96PV7 902 aaPredicted RBP22.41■■□□□ 1.18
CCS-208ENST00000533244 LRRC27Q9C0I9 530 aa22.41■■□□□ 1.18
CCS-208ENST00000533244 OLFML3Q9NRN5 406 aa22.41■■□□□ 1.18
CCS-208ENST00000533244 PUF60Q9UHX1 559 aaKnown RBP22.41■■□□□ 1.18
CCS-208ENST00000533244 XIRP2A4UGR9 3374 aa22.41■■□□□ 1.18
CCS-208ENST00000533244 CMA1P23946 247 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 MCL1Q07820 350 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 SKIV2LQ15477 1246 aaKnown RBP22.4■■□□□ 1.18
CCS-208ENST00000533244 ZNF720Q7Z2F6 126 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 STAMQ92783 540 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms