RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 NT5DC1Q5TFE4 455 aa9.1□□□□□ -0.95
NEDD8-207ENST00000533242 ZNF598Q86UK7 904 aaKnown RBP9.1□□□□□ -0.95
NEDD8-207ENST00000533242 CCDC105Q8IYK2 499 aa9.1□□□□□ -0.95
NEDD8-207ENST00000533242 METTL13Q8N6R0 699 aa9.1□□□□□ -0.95
NEDD8-207ENST00000533242 LINC01465Q8N7H1 131 aa9.1□□□□□ -0.95
NEDD8-207ENST00000533242 ZNF713Q8N859 430 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-207ENST00000533242 LRRN4CLQ8ND94 238 aa9.1□□□□□ -0.95
NEDD8-207ENST00000533242 DHX58Q96C10 678 aa9.1□□□□□ -0.95
NEDD8-207ENST00000533242 PPP1R13BQ96KQ4 1090 aa9.1□□□□□ -0.95
NEDD8-207ENST00000533242 MAP7D2Q96T17 732 aa9.1□□□□□ -0.95
NEDD8-207ENST00000533242 ZBP1Q9H171 429 aa9.1□□□□□ -0.95
NEDD8-207ENST00000533242 CYP26B1Q9NR63 512 aa9.1□□□□□ -0.95
NEDD8-207ENST00000533242 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.1□□□□□ -0.95
NEDD8-207ENST00000533242 DBR1Q9UK59 544 aaKnown RBP9.1□□□□□ -0.95
NEDD8-207ENST00000533242 MAFBQ9Y5Q3 323 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-207ENST00000533242 V9GYY5 206 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-207ENST00000533242 CACNA1HO95180 2353 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 SERPINC1P01008 464 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 WEE2P0C1S8 567 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 CD44P16070 742 aaKnown RBP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 AOC1P19801 751 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 SFPQP23246 707 aaKnown RBP eCLIP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 CLK2P49760 499 aaKnown RBP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 BCAR1P56945 870 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 IL17AQ16552 155 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 ZNF746Q6NUN9 644 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 SMYD4Q8IYR2 804 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 C12orf76Q8N812 135 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 SPATA20Q8TB22 786 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 STAMQ92783 540 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 FAM167AQ96KS9 214 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 SAMSN1Q9NSI8 373 aaKnown RBP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 RBM28Q9NW13 759 aaKnown RBP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 IRAK3Q9Y616 596 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 C5orf42Q9H799 3197 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 A0A0U1RQF3 1178 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 PSAPP07602 524 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 CYP3A4P08684 503 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 ATXN8OSP0DMR3 200 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 ZNF18P17022 549 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 EIF4BP23588 611 aaKnown RBP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 TMOD1P28289 359 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 CA8P35219 290 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 KRT2P35908 639 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 AFMP43652 599 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 CLCN3P51790 818 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 NLRP11P59045 1033 aaKnown RBP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 TYW1BQ6NUM6 668 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 EFCAB12Q6NXP0 572 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 DDX53Q86TM3 631 aaKnown RBP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 TMEM139Q8IV31 216 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 SMAP1Q8IYB5 467 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 ZNF579Q8NAF0 562 aaKnown RBP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 RNF169Q8NCN4 708 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 HELQQ8TDG4 1101 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 ACSF2Q96CM8 615 aaPredicted RBP9.09□□□□□ -0.95
NEDD8-207ENST00000533242 TMEM169Q96HH4 297 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 RTP3Q9BQQ7 232 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 KCND1Q9NSA2 647 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 TBC1D22BQ9NU19 505 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 AKT3Q9Y243 479 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 NFE2L3Q9Y4A8 694 aa9.09□□□□□ -0.95
NEDD8-207ENST00000533242 IGLV3-22A0A075B6J6 115 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-207ENST00000533242 SMCO2A6NFE2 343 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 IPO5O00410 1097 aaKnown RBP9.08□□□□□ -0.96
NEDD8-207ENST00000533242 CTSAP10619 480 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 EPCAMP16422 314 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 NPR3P17342 541 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 ALDH7A1P49419 539 aaKnown RBP9.08□□□□□ -0.96
NEDD8-207ENST00000533242 AKAP17AQ02040 695 aaKnown RBP9.08□□□□□ -0.96
NEDD8-207ENST00000533242 DPYDQ12882 1025 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 TDGQ13569 410 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 OTOP3Q7RTS5 596 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 PPFIBP1Q86W92 1011 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 VSTM4Q8IW00 320 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 VPS52Q8N1B4 723 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 DTWD2Q8NBA8 298 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 CCDC150Q8NCX0 1101 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 CCDC112Q8NEF3 446 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 FLCNQ8NFG4 579 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 MTRQ99707 1265 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 SFXN1Q9H9B4 322 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 ZFHX2Q9C0A1 2572 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-207ENST00000533242 FAM86B1E9PN63 330 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 FAM86B2P0C5J1 330 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 DARSP14868 501 aaKnown RBP9.08□□□□□ -0.96
NEDD8-207ENST00000533242 CDC25AP30304 524 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 GPC3P51654 580 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 SETQ01105 290 aaPredicted RBP9.08□□□□□ -0.96
NEDD8-207ENST00000533242 PTGDRQ13258 359 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 ANGPT1Q15389 498 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 GPR149Q86SP6 731 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 CRYGNQ8WXF5 182 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 ZNF577Q9BSK1 485 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 SEMA4AQ9H3S1 761 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 GABBR1Q9UBS5 961 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 TCEAL9Q9UHQ7 104 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 DUSP12Q9UNI6 340 aa9.08□□□□□ -0.96
NEDD8-207ENST00000533242 PAXBP1Q9Y5B6 917 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms