RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 HVCN1Q96D96 273 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 GUCD1Q96NT3 240 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 APOL6Q9BWW8 343 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 PRDM12Q9H4Q4 367 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 CWH43Q9H720 699 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 RSAD1Q9HA92 442 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 TYW1Q9NV66 732 aaKnown RBP13.15□□□□□ -0.3
SSBP3-214ENST00000533209 MTUS1Q9ULD2 1270 aa13.15□□□□□ -0.3
SSBP3-214ENST00000533209 INPPL1O15357 1258 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 TOM1L1O75674 476 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 GCNT3O95395 438 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 MCF2P10911 925 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 AKAP5P24588 427 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 KCNA1Q09470 495 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 ZNF568Q3ZCX4 644 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 EPC2Q52LR7 807 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 NOMO2Q5JPE7 1267 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 L1TD1Q5T7N2 865 aaKnown RBP13.14□□□□□ -0.31
SSBP3-214ENST00000533209 SLC39A4Q6P5W5 647 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 MPZL3Q6UWV2 235 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 ZBTB33Q86T24 672 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 TMEM192Q8IY95 271 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 HACE1Q8IYU2 909 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 LRRC43Q8N309 656 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 GLIS3Q8NEA6 775 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 ARNTL2Q8WYA1 636 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 RSPH1Q8WYR4 309 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 BICD1Q96G01 975 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 SAMD11Q96NU1 681 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 HAPLN2Q9GZV7 340 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 UBN1Q9NPG3 1134 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 SNTG2Q9NY99 539 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 INPP5FQ9Y2H2 1132 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 GIT1Q9Y2X7 761 aa13.14□□□□□ -0.31
SSBP3-214ENST00000533209 MYH11P35749 1972 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 ARL5CA6NH57 179 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 ANKRD63C9JTQ0 380 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 C5orf67F2Z3F1 127 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 RFXAPO00287 272 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 HNRNPDLO14979 420 aaKnown RBP13.13□□□□□ -0.31
SSBP3-214ENST00000533209 NR1I2O75469 434 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 MYL1P05976 194 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 BMPR1AP36894 532 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 MLH1P40692 756 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 LIG4P49917 911 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 MCL1Q07820 350 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 ALCAMQ13740 583 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 FAM26FQ5R3K3 315 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 EPM2AIP1Q7L775 607 aaPredicted RBP13.13□□□□□ -0.31
SSBP3-214ENST00000533209 APBB1IPQ7Z5R6 666 aaPredicted RBP13.13□□□□□ -0.31
SSBP3-214ENST00000533209 CEP120Q8N960 986 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 ZFP42Q96MM3 310 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 ACCSQ96QU6 501 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 GAD1Q99259 594 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 CDX2Q99626 313 aaPredicted RBP13.13□□□□□ -0.31
SSBP3-214ENST00000533209 TCHPQ9BT92 498 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 MRPL9Q9BYD2 267 aaKnown RBP13.13□□□□□ -0.31
SSBP3-214ENST00000533209 IKZF4Q9H2S9 585 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 TBC1D13Q9NVG8 400 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 PARP2Q9UGN5 583 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 PCDHB13Q9Y5F0 798 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 TRANK1O15050 2925 aa13.13□□□□□ -0.31
SSBP3-214ENST00000533209 ZMYM2Q9UBW7 1377 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 TISP43B9A030 160 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 CLDN3O15551 220 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 B4GALT3O60512 393 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 LPXNO60711 386 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 RECQL4O94761 1208 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 PRPF6O94906 941 aaKnown RBP13.12□□□□□ -0.31
SSBP3-214ENST00000533209 CTNNB1P35222 781 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 GRM5P41594 1212 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 DPYDQ12882 1025 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 NOLC1Q14978 699 aaKnown RBP eCLIP13.12□□□□□ -0.31
SSBP3-214ENST00000533209 KANK3Q6NY19 840 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 THNSL1Q8IYQ7 743 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 COLGALT1Q8NBJ5 622 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 GSTCDQ8NEC7 633 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 URGCPQ8TCY9 931 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 MYLIPQ8WY64 445 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 CXCL16Q9H2A7 254 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 MIOSQ9NXC5 875 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 KLK14Q9P0G3 267 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 KANSL3Q9P2N6 904 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 ANKFY1Q9P2R3 1169 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 GDAQ9Y2T3 454 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 RWDD3Q9Y3V2 267 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 STYXL1Q9Y6J8 313 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 FNDC1Q4ZHG4 1894 aaPredicted RBP13.12□□□□□ -0.31
SSBP3-214ENST00000533209 CDH23Q9H251 3354 aa13.12□□□□□ -0.31
SSBP3-214ENST00000533209 A0A0B4J269 797 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 H3BNC9 293 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 FAM189A1O60320 539 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 PRPF40AO75400 957 aaKnown RBP13.11□□□□□ -0.31
SSBP3-214ENST00000533209 POMCP01189 267 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 RPN1P04843 607 aaKnown RBP13.11□□□□□ -0.31
SSBP3-214ENST00000533209 RB1P06400 928 aa13.11□□□□□ -0.31
SSBP3-214ENST00000533209 HARSP12081 509 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms